Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 AL359263.1-201ENST00000441188 2796 ntBASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NEUROD4Q9HD90 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 Y_RNA.46-201ENST00000362695 102 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 SNORA4.3-201ENST00000365564 137 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 SNORA32.2-201ENST00000384049 122 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 RNU6-463P-201ENST00000384340 107 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 RPL23AP32-201ENST00000395315 459 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 MIR541-201ENST00000401360 84 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 RN7SKP140-201ENST00000411196 284 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 MTND3P8-201ENST00000412909 339 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC073069.1-201ENST00000428657 441 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC108059.2-201ENST00000434626 151 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC013403.1-201ENST00000436954 263 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 SNRPEP7-201ENST00000438350 220 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC011742.2-201ENST00000443818 352 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC073476.1-201ENST00000452854 407 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 RNU6-261P-201ENST00000459506 102 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 SNORD19B-201ENST00000459623 84 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC108693.1-201ENST00000496068 432 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 TECRP2-201ENST00000503270 928 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC021146.2-201ENST00000504736 556 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 PCBP2P3-201ENST00000509726 843 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 Vault.3-201ENST00000516676 95 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC010525.2-201ENST00000590920 195 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 VN1R84P-201ENST00000593697 235 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC131009.3-201ENST00000621809 287 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 WDR95P-201ENST00000425638 1542 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 SMG1P7-201ENST00000565246 2704 ntBASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NEUROD4Q9HD90 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NEUROD4Q9HD90 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 MTND4P35-201ENST00000604257 1375 ntBASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 AC119674.1-204ENST00000641348 1343 ntBASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 OR10D1P-201ENST00000355343 936 ntBASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 Y_RNA.145-201ENST00000363527 102 ntBASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 RNA5SP429-201ENST00000363688 109 ntBASIC6.58□□□□□ -1.36
NEUROD4Q9HD90 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 585.5 ms