Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NANOGP2-201ENST00000435391 727 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC091862.1-201ENST00000438016 1100 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 ELOCP10-201ENST00000440624 327 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 EEF1A1P39-201ENST00000440791 250 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 SEPT14P24-201ENST00000447236 180 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 TPT1P14-201ENST00000448018 505 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 NPM1P39-201ENST00000449818 867 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC092001.1-201ENST00000453012 261 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 MTND2P24-201ENST00000453434 806 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 RPL23AP12-201ENST00000467573 473 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC098847.1-201ENST00000473094 348 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 RPS4XP6-201ENST00000477670 797 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC099521.1-201ENST00000482557 334 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 DUTP1-201ENST00000493631 470 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC106822.1-201ENST00000502647 526 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC016957.1-201ENST00000534895 309 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC087883.1-201ENST00000551882 391 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 ZNF519P3-201ENST00000557158 1032 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC136619.2-201ENST00000563361 631 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC092332.1-201ENST00000563684 829 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC090616.2-202ENST00000584248 222 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS11Q9H270 MIR7853-201ENST00000584820 132 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 MTCYBP22-201ENST00000603788 447 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 ELOCP34-201ENST00000604436 327 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC010632.3-201ENST00000611377 369 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC122133.1-201ENST00000613964 233 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 HTR1DP1-201ENST00000616500 888 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AC138932.5-201ENST00000617759 563 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS11Q9H270 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 AP005435.3-201ENST00000531260 3198 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 CR381670.1-201ENST00000624291 1693 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VPS11Q9H270 AC092079.1-201ENST00000558620 1985 ntBASIC5.71□□□□□ -1.49
VPS11Q9H270 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
VPS11Q9H270 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC144833.1-201ENST00000567953 4089 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS11Q9H270 ENSAP3-201ENST00000312710 333 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 FAM133CP-201ENST00000332869 704 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS11Q9H270 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS11Q9H270 GCNT1P4-201ENST00000404096 329 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC016739.1-201ENST00000405359 345 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 RN7SKP146-201ENST00000410242 334 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC096921.1-201ENST00000411661 375 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 CCDC58P2-201ENST00000417131 366 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 EIF1P1-201ENST00000421436 341 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS11Q9H270 MTCO3P1-205ENST00000422088 832 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 CENPIP1-201ENST00000425713 902 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 HMGN2P27-201ENST00000427352 270 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC122718.1-201ENST00000439448 744 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC092170.1-201ENST00000440211 356 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 CNOT7P2-201ENST00000441051 832 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AC007383.1-201ENST00000445875 636 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS11Q9H270 AC234781.3-201ENST00000452540 973 ntBASIC5.71□□□□□ -1.5
VPS11Q9H270 FAM133DP-201ENST00000464802 691 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms