Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RPL23P2-201ENST00000320371 421 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RNA5SP502-201ENST00000362694 119 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 U3.3-201ENST00000362986 216 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 RNA5SP507-201ENST00000363603 121 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 NUDT19P3-201ENST00000404698 555 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 UBE2V1P15-201ENST00000407776 448 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 U3.36-201ENST00000408418 213 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RN7SKP16-201ENST00000410180 299 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 RN7SKP125-201ENST00000410481 302 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 CYCSP10-201ENST00000417973 294 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC096992.1-201ENST00000459808 709 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 TRBV8-2-201ENST00000475637 270 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC004815.1-201ENST00000484185 331 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 RPL7P41-201ENST00000485823 957 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC134349.2-201ENST00000535136 910 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC115621.1-201ENST00000604653 858 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AL392112.1-201ENST00000605115 829 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC211433.2-201ENST00000608433 387 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AP001033.2-201ENST00000609701 1003 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC009163.6-201ENST00000612367 342 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 RPSAP73-201ENST00000614820 330 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC018445.2-201ENST00000622987 260 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC099494.2-201ENST00000623371 978 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC083865.1-201ENST00000636634 831 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 AC109780.1-201ENST00000451768 1344 ntBASIC4.87□□□□□ -1.63
VMP1Q96GC9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.87□□□□□ -1.63
VMP1Q96GC9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VMP1Q96GC9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC023421.1-201ENST00000590535 1785 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 U8.4-201ENST00000363626 134 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 RNA5SP90-201ENST00000364801 99 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 RNA5SP239-201ENST00000410218 129 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 RN7SKP213-201ENST00000410746 298 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 RNU2-6P-201ENST00000411404 190 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 RPL35AP21-201ENST00000437667 333 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 YWHAQP9-201ENST00000445891 512 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AL445433.1-201ENST00000457507 257 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 RN7SL189P-201ENST00000468631 289 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC108729.2-201ENST00000476543 840 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 NPM1P17-201ENST00000479221 602 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC090686.1-201ENST00000481577 749 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC008953.1-201ENST00000497334 318 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AL035404.1-201ENST00000497982 568 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 OR5M14P-201ENST00000506803 618 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms