Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AL391597.1-201ENST00000618707 694 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 A2MP1-204ENST00000566278 4130 ntBASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUDCD3Q8IVD9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC074029.4-201ENST00000624796 1859 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 CPHL1P-201ENST00000461341 3407 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 ZNF137P-201ENST00000456718 1920 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RNA5SP104-201ENST00000410989 118 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC004552.1-201ENST00000419089 348 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RPS12P10-201ENST00000427031 377 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RPS26P3-201ENST00000470205 348 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 LARP7P4-201ENST00000481075 878 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC090543.2-201ENST00000483963 348 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC004057.1-201ENST00000485827 348 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RNA5SP34-201ENST00000516887 130 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 SEC11B-201ENST00000518383 499 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 HAUS8P1-201ENST00000549005 542 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC090515.3-201ENST00000560431 315 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC007620.3-201ENST00000608131 497 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RMST_5.1-201ENST00000618704 126 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC105105.5-201ENST00000622635 1294 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AP002799.1-201ENST00000623552 423 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC067931.1-201ENST00000624190 671 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 KARSP3-201ENST00000571212 1504 ntBASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NUDCD3Q8IVD9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NUDCD3Q8IVD9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUDCD3Q8IVD9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NUDCD3Q8IVD9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUDCD3Q8IVD9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUDCD3Q8IVD9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 RNA5SP123-201ENST00000363244 119 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 SNORD74.4-201ENST00000364129 80 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 SNORA71.2-201ENST00000364941 134 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 ATG4AP1-201ENST00000416893 538 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC093084.1-201ENST00000424233 687 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC016831.4-201ENST00000438302 307 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 CCRL1P1-201ENST00000449542 1053 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 EIF4A1P11-201ENST00000451239 222 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC074386.1-201ENST00000476560 767 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 RN7SL629P-201ENST00000489622 285 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC025445.1-201ENST00000502728 300 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 OR51K1P-201ENST00000510214 950 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 PARP4P3-201ENST00000510265 317 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms