Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 RNU6-636P-201ENST00000384598 107 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 MIR141-201ENST00000384975 95 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC104837.2-201ENST00000427236 424 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 RPL7P29-201ENST00000437151 728 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC005410.1-202ENST00000460347 485 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 RPS3AP41-201ENST00000462701 778 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 RPS4XP20-201ENST00000505751 772 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 MTND6P2-201ENST00000512226 524 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 MRPS36P3-201ENST00000519284 130 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 OR5AZ1P-201ENST00000527448 943 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 OR8A2P-201ENST00000528631 952 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AL390334.1-201ENST00000556395 450 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC027104.1-201ENST00000563702 681 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC023813.2-201ENST00000564321 469 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC095057.3-201ENST00000567102 1157 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AL163952.1-202ENST00000569625 600 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC022884.3-201ENST00000579571 248 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC011447.4-201ENST00000587562 111 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AL035411.2-201ENST00000604022 421 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AL133481.2-203ENST00000607558 139 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC092954.1-201ENST00000609121 445 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC009237.15-201ENST00000610252 501 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC092106.3-201ENST00000611308 722 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC231759.1-201ENST00000616455 597 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 AC015660.5-201ENST00000623238 564 ntBASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SLC44A4Q53GD3 SMG1P4-204ENST00000523028 4131 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 SNORA51.8-201ENST00000384234 132 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 RN7SKP126-201ENST00000411143 300 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 GTF2IP2-201ENST00000424290 697 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 TXNL1P1-201ENST00000429528 554 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 VN1R108P-201ENST00000431580 830 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 NANOGP2-201ENST00000435391 727 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC023271.1-201ENST00000445936 1090 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 RPL31P44-201ENST00000447680 377 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AL589880.1-201ENST00000448271 287 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 RNU7-27P-201ENST00000459281 62 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 FTH1P2-201ENST00000466086 412 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 RN7SL197P-201ENST00000466981 299 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC009127.1-201ENST00000467090 155 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC104687.1-201ENST00000485829 412 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC091860.1-201ENST00000505723 432 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PRELID3BP4-201ENST00000515476 571 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PMS2P3-207ENST00000529061 717 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 NPM1P47-201ENST00000560843 856 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 MTCO1P40-201ENST00000574371 625 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AP005403.1-201ENST00000579720 229 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC015688.2-201ENST00000584523 262 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC091057.2-201ENST00000602594 792 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AL392112.1-201ENST00000605115 829 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms