Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CMC4P56277 AC093535.2-201ENST00000624769 2326 ntBASIC3.39□□□□□ -1.87
CMC4P56277 MTCO1P8-201ENST00000416914 1523 ntBASIC3.39□□□□□ -1.87
CMC4P56277 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 LINC00622-201ENST00000562811 1570 ntBASIC3.39□□□□□ -1.87
CMC4P56277 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CMC4P56277 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 AL034374.1-201ENST00000406329 351 ntBASIC3.39□□□□□ -1.87
CMC4P56277 MIR1271-201ENST00000408537 86 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AL590806.1-201ENST00000415818 853 ntBASIC3.39□□□□□ -1.87
CMC4P56277 UBTFL3-201ENST00000418934 1024 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC092570.3-201ENST00000420113 693 ntBASIC3.39□□□□□ -1.87
CMC4P56277 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.39□□□□□ -1.87
CMC4P56277 AC006065.1-201ENST00000422539 802 ntBASIC3.39□□□□□ -1.87
CMC4P56277 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 EIF1P3-201ENST00000423841 334 ntBASIC3.39□□□□□ -1.87
CMC4P56277 CNOT7P1-201ENST00000429006 852 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC068287.1-201ENST00000430283 295 ntBASIC3.39□□□□□ -1.87
CMC4P56277 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 AC007563.3-201ENST00000433233 371 ntBASIC3.39□□□□□ -1.87
CMC4P56277 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 YWHAZP2-201ENST00000440317 728 ntBASIC3.39□□□□□ -1.87
CMC4P56277 FHP1-201ENST00000442741 703 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC011753.3-201ENST00000443436 406 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC108463.1-201ENST00000450258 347 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC243772.1-201ENST00000451620 410 ntBASIC3.39□□□□□ -1.87
CMC4P56277 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.39□□□□□ -1.87
CMC4P56277 snoU13.1-201ENST00000459157 104 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC108751.2-201ENST00000469993 231 ntBASIC3.39□□□□□ -1.87
CMC4P56277 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 UBTFL6-201ENST00000477929 1024 ntBASIC3.39□□□□□ -1.87
CMC4P56277 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.39□□□□□ -1.87
CMC4P56277 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.39□□□□□ -1.87
CMC4P56277 RNA5SP228-201ENST00000516232 133 ntBASIC3.39□□□□□ -1.87
CMC4P56277 RNU6-551P-201ENST00000516661 103 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC067904.2-201ENST00000517322 1283 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC022784.5-201ENST00000522241 437 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC092868.3-201ENST00000560515 784 ntBASIC3.39□□□□□ -1.87
CMC4P56277 ATP5J2P6-201ENST00000565203 266 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 AC008759.1-201ENST00000589783 983 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC234771.5-201ENST00000600161 514 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 MIR6820-201ENST00000611508 62 ntBASIC3.39□□□□□ -1.87
CMC4P56277 AC022106.2-201ENST00000620114 757 ntBASIC3.39□□□□□ -1.87
CMC4P56277 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 PHKBP1-201ENST00000450951 1951 ntBASIC3.39□□□□□ -1.87
CMC4P56277 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CMC4P56277 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CMC4P56277 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.39□□□□□ -1.87
CMC4P56277 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.39□□□□□ -1.87
CMC4P56277 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMC4P56277 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.39□□□□□ -1.87
CMC4P56277 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.38□□□□□ -1.87
CMC4P56277 BTBD10P1-201ENST00000549824 1352 ntBASIC3.38□□□□□ -1.87
CMC4P56277 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CMC4P56277 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.38□□□□□ -1.87
CMC4P56277 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CMC4P56277 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 RNU6-178P-201ENST00000384631 104 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AL359643.1-201ENST00000404109 423 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 DNAJC19P7-201ENST00000428811 344 ntBASIC3.38□□□□□ -1.87
CMC4P56277 RPL21P91-201ENST00000429231 479 ntBASIC3.38□□□□□ -1.87
CMC4P56277 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.38□□□□□ -1.87
CMC4P56277 MTCO3P21-201ENST00000430791 643 ntBASIC3.38□□□□□ -1.87
CMC4P56277 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 MAPRE1P3-201ENST00000435438 796 ntBASIC3.38□□□□□ -1.87
CMC4P56277 CACYBPP1-201ENST00000438592 684 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms