Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.04□□□□□ -1.6
SMAD6O43541 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 AC099654.2-201ENST00000433031 1980 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 ECM1P2-201ENST00000503354 1577 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC009501.3-201ENST00000605001 1352 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMAD6O43541 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMAD6O43541 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.03□□□□□ -1.6
SMAD6O43541 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMAD6O43541 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMAD6O43541 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC132825.1-201ENST00000463573 2247 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC021242.1-201ENST00000507315 2035 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMAD6O43541 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMAD6O43541 RN7SKP103-201ENST00000363848 320 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SMAD6O43541 MIR585-201ENST00000384887 94 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC013442.1-201ENST00000397347 228 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AL049545.1-201ENST00000401856 572 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AL021331.1-201ENST00000402817 582 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMAD6O43541 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 AL360081.1-201ENST00000428299 555 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.03□□□□□ -1.6
SMAD6O43541 RPS6P15-201ENST00000431996 751 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 ZNF965P-201ENST00000432501 817 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.03□□□□□ -1.6
SMAD6O43541 AL049745.1-201ENST00000433953 286 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC008072.1-201ENST00000434254 824 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC093414.1-201ENST00000434712 514 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.03□□□□□ -1.6
SMAD6O43541 TCEA1P3-201ENST00000443005 880 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 OR52J1P-201ENST00000450596 932 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 VN1R40P-201ENST00000455196 941 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AP000942.1-201ENST00000463969 747 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC021660.1-201ENST00000465006 554 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC090543.1-201ENST00000492168 485 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AL049874.2-201ENST00000492636 288 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 MTND4LP2-201ENST00000502312 285 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC091435.1-201ENST00000505442 584 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.03□□□□□ -1.6
SMAD6O43541 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.03□□□□□ -1.6
SMAD6O43541 OR7H2P-201ENST00000513483 306 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 RNU6-311P-201ENST00000516224 102 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC103833.1-201ENST00000517442 172 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.03□□□□□ -1.6
SMAD6O43541 AL442163.2-201ENST00000553912 710 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 AL606834.3-201ENST00000602615 496 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AL160237.3-201ENST00000604114 1013 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC005084.1-201ENST00000605160 304 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AP001521.2-201ENST00000608772 546 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC116651.1-201ENST00000609724 556 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC096586.1-201ENST00000610267 561 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 RNU6-1192P-201ENST00000612197 107 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 RNU6-489P-201ENST00000618289 107 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC013470.4-201ENST00000619978 986 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.03□□□□□ -1.6
SMAD6O43541 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 FRG1EP-201ENST00000634469 770 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
SMAD6O43541 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
SMAD6O43541 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SMAD6O43541 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
SMAD6O43541 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SMAD6O43541 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SMAD6O43541 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMAD6O43541 RNA5SP191-201ENST00000362585 102 ntBASIC5.02□□□□□ -1.61
SMAD6O43541 RPL21P67-201ENST00000402896 478 ntBASIC5.02□□□□□ -1.61
SMAD6O43541 AC096533.1-201ENST00000411645 353 ntBASIC5.02□□□□□ -1.61
SMAD6O43541 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
SMAD6O43541 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.02□□□□□ -1.61
SMAD6O43541 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms