Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC006971.1-201ENST00000407916 4486 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 RNA5SP515-201ENST00000364570 118 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 RNA5SP479-201ENST00000364858 117 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 RFESDP1-201ENST00000422350 461 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 YY1P1-201ENST00000427625 668 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 RPS27AP12-201ENST00000429552 465 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 ARL4AP3-201ENST00000441452 574 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC104849.1-201ENST00000462623 405 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC108475.1-201ENST00000507880 950 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC090151.1-201ENST00000520784 730 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AP001804.2-201ENST00000533932 910 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 ARF4P1-201ENST00000605447 541 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AP003497.2-201ENST00000624220 967 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 MTCO1P7-201ENST00000419523 1542 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AL158163.1-201ENST00000603915 1649 ntBASIC5.3□□□□□ -1.56
SALL1Q9NSC2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL1Q9NSC2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 ATP5F1P2-201ENST00000398143 760 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 RNU6-775P-201ENST00000459318 96 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 RPS20P4-201ENST00000461659 355 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AC008958.1-201ENST00000511047 682 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 RN7SKP5-201ENST00000517045 272 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 AC006272.2-201ENST00000594725 163 ntBASIC5.29□□□□□ -1.56
SALL1Q9NSC2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SALL1Q9NSC2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 MIR383-201ENST00000362257 73 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 RNA5SP307-201ENST00000362863 116 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 Y_RNA.126-201ENST00000363382 111 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AL161909.1-201ENST00000397390 712 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 SEPT7P8-201ENST00000413308 775 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 CYP4F29P-201ENST00000420685 446 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AL358176.3-201ENST00000420757 454 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 CDY14P-201ENST00000431260 1014 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 UBE2V2P1-201ENST00000434717 398 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 CDY12P-201ENST00000440679 1015 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 CDY13P-201ENST00000445813 1015 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 CDY23P-201ENST00000451661 1014 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC090013.1-201ENST00000485147 480 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC007224.1-201ENST00000564410 144 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC027455.1-201ENST00000574104 594 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 CCDC58P3-201ENST00000590792 430 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC008966.2-201ENST00000606157 453 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC025175.1-201ENST00000606482 759 ntBASIC5.28□□□□□ -1.56
SALL1Q9NSC2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.28□□□□□ -1.56
SALL1Q9NSC2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms