Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 DEFB108C-201ENST00000400154 252 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009804.1-201ENST00000400949 179 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC096921.1-201ENST00000411661 375 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC004074.1-201ENST00000421810 1063 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC007161.1-204ENST00000423039 460 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 IPMKP1-201ENST00000425988 855 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 SGO1P2-201ENST00000429458 1589 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 MTCO1P45-201ENST00000431457 267 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 FTLP19-201ENST00000433300 394 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 Z74696.2-201ENST00000436514 498 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 COX7BP2-201ENST00000437976 242 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009263.1-201ENST00000441193 1239 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 CYCSP51-201ENST00000443545 318 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 SEPT7P3-201ENST00000455017 621 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RPL35AP19-201ENST00000469425 329 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SL188P-201ENST00000469842 285 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC104763.1-201ENST00000475274 360 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RPL7P39-201ENST00000481157 744 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SL547P-201ENST00000490793 290 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SL447P-201ENST00000494711 245 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 GLUD1P3-202ENST00000508551 200 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 GAPDHP62-201ENST00000515313 990 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SKP5-201ENST00000517045 272 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC122688.1-201ENST00000541494 223 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC245505.1-201ENST00000556398 224 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF519P3-201ENST00000557158 1032 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 MTND1P15-201ENST00000579262 949 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 SUGT1P3-202ENST00000604259 383 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC015849.2-201ENST00000605738 409 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC010857.1-201ENST00000606398 594 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AL445423.1-201ENST00000609941 536 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CDK5RAP1Q96SZ6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CDK5RAP1Q96SZ6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CDK5RAP1Q96SZ6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 RNA5SP234-201ENST00000363916 119 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 SNORA26.8-201ENST00000391306 124 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 RNU2-22P-201ENST00000411266 212 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF863P-201ENST00000426746 417 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 RPL12P17-201ENST00000432393 498 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 SNRPEP8-201ENST00000442866 260 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 HMGB3P6-201ENST00000444896 598 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092001.1-201ENST00000453012 261 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 OR2A3P-201ENST00000493774 953 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092045.1-201ENST00000495716 1231 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 RPS17P5-201ENST00000498293 408 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC138853.1-201ENST00000503549 823 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms