Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC093311.1-201ENST00000506586 2021 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 OR9G4-201ENST00000302957 984 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 TCEA1P4-201ENST00000415066 844 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC073310.1-201ENST00000423226 1033 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 CNOT7P1-201ENST00000429006 852 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 FTH1P16-201ENST00000435241 552 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AL354714.3-201ENST00000447284 493 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 OR1H1P-201ENST00000448731 937 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AL035407.2-201ENST00000454090 378 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC010326.1-201ENST00000462726 602 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC010350.1-201ENST00000504908 231 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 TPT1P8-201ENST00000510120 555 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 RN7SKP92-201ENST00000517266 244 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC022360.1-201ENST00000521058 340 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AP003066.2-201ENST00000529375 555 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC011611.5-201ENST00000552477 578 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC009852.2-201ENST00000567898 485 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC012254.4-201ENST00000588843 273 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC023813.4-201ENST00000607580 580 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 OR7A19P-201ENST00000608051 733 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC004808.1-201ENST00000627671 721 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 AL356118.1-201ENST00000635272 1078 ntBASIC5.49□□□□□ -1.53
HERC6Q8IVU3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
HERC6Q8IVU3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL603750.1-201ENST00000624216 1717 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 RNU6-249P-201ENST00000363016 102 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 RNA5SP27-201ENST00000363839 119 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 RNU1-74P-201ENST00000384108 171 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 RSL24D1P1-201ENST00000404972 493 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AF186996.5-201ENST00000418098 904 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL121878.1-201ENST00000418638 859 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC241520.1-201ENST00000422654 1099 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 RSL24D1P6-201ENST00000426934 401 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC044797.1-201ENST00000445744 679 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL096803.2-201ENST00000450032 677 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC008427.1-201ENST00000503102 655 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 MORF4L1P3-201ENST00000525966 950 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AC027104.1-201ENST00000563702 681 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.48□□□□□ -1.53
HERC6Q8IVU3 MIR7853-201ENST00000584820 132 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 VN1R84P-201ENST00000593697 235 ntBASIC5.48□□□□□ -1.53
HERC6Q8IVU3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms