Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.2□□□□□ -1.74
RFX4Q33E94 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX4Q33E94 ASNSP1-201ENST00000518311 1939 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.2□□□□□ -1.74
RFX4Q33E94 CR788268.1-201ENST00000603931 1809 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFX4Q33E94 AL391684.1-202ENST00000641293 1636 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFX4Q33E94 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.19□□□□□ -1.74
RFX4Q33E94 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.19□□□□□ -1.74
RFX4Q33E94 TRY2P-201ENST00000448860 689 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AC104306.1-201ENST00000449702 371 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AL451050.1-201ENST00000450126 415 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 snoU13.20-201ENST00000459180 104 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AC018638.3-201ENST00000461273 132 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AC004815.1-201ENST00000484185 331 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 SCARNA22-201ENST00000503991 125 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.19□□□□□ -1.74
RFX4Q33E94 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.19□□□□□ -1.74
RFX4Q33E94 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.19□□□□□ -1.74
RFX4Q33E94 PHBP17-201ENST00000528576 541 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 HMGN2P6-201ENST00000551091 273 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.19□□□□□ -1.74
RFX4Q33E94 RPL23AP97-201ENST00000568955 471 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.19□□□□□ -1.74
RFX4Q33E94 RN7SL753P-201ENST00000581238 290 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.19□□□□□ -1.74
RFX4Q33E94 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 AL391597.1-201ENST00000618707 694 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 AL023881.1-201ENST00000621088 301 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 CASC19-222ENST00000641321 1173 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 MAPK10-304ENST00000641341 3984 ntBASIC4.19□□□□□ -1.74
RFX4Q33E94 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.19□□□□□ -1.74
RFX4Q33E94 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
RFX4Q33E94 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX4Q33E94 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 MIR323B-201ENST00000385269 82 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 RN7SKP267-201ENST00000410381 285 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 BX510359.3-201ENST00000422168 306 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.18□□□□□ -1.74
RFX4Q33E94 IPMKP1-201ENST00000425988 855 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC007559.1-201ENST00000428736 355 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 OR2B7P-201ENST00000429302 934 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 RBMY2QP-201ENST00000429799 1147 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 UBE2V2P3-201ENST00000433562 437 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 ELOCP8-201ENST00000439309 332 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 ELOCP15-201ENST00000442090 332 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 CEACAMP7-201ENST00000444105 496 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 OR52J1P-201ENST00000450596 932 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.18□□□□□ -1.74
RFX4Q33E94 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.18□□□□□ -1.74
RFX4Q33E94 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.18□□□□□ -1.74
RFX4Q33E94 PGBD4P4-201ENST00000509673 613 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 BTF3P13-201ENST00000513224 490 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 RNU6-551P-201ENST00000516661 103 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 NPM1P52-201ENST00000518264 846 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 RN7SL652P-201ENST00000577769 300 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX4Q33E94 BPIFA4P-203ENST00000603168 689 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.18□□□□□ -1.74
RFX4Q33E94 AC007546.2-201ENST00000623996 360 ntBASIC4.18□□□□□ -1.74
RFX4Q33E94 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RFX4Q33E94 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms