Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC107075.1-201ENST00000613695 314 ntBASIC4.99□□□□□ -1.61
RAE1P78406 MIR7973-1-201ENST00000614683 76 ntBASIC4.99□□□□□ -1.61
RAE1P78406 AC005840.5-201ENST00000619166 599 ntBASIC4.99□□□□□ -1.61
RAE1P78406 AC004943.3-201ENST00000624116 600 ntBASIC4.99□□□□□ -1.61
RAE1P78406 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.99□□□□□ -1.61
RAE1P78406 SNORA17.5-201ENST00000630429 132 ntBASIC4.99□□□□□ -1.61
RAE1P78406 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.99□□□□□ -1.61
RAE1P78406 AC087821.2-201ENST00000637086 450 ntBASIC4.99□□□□□ -1.61
RAE1P78406 AC073136.1-201ENST00000449426 2884 ntBASIC4.99□□□□□ -1.61
RAE1P78406 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RAE1P78406 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAE1P78406 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.99□□□□□ -1.61
RAE1P78406 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAE1P78406 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
RAE1P78406 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RAE1P78406 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RAE1P78406 TTC39DP-201ENST00000416781 1688 ntBASIC4.99□□□□□ -1.61
RAE1P78406 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RAE1P78406 DDX18P5-201ENST00000534547 1306 ntBASIC4.98□□□□□ -1.61
RAE1P78406 DDX18P4-201ENST00000511690 1966 ntBASIC4.98□□□□□ -1.61
RAE1P78406 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 AC011755.1-201ENST00000623763 2049 ntBASIC4.98□□□□□ -1.61
RAE1P78406 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RAE1P78406 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 IGKV7-3-201ENST00000357453 298 ntBASIC4.98□□□□□ -1.61
RAE1P78406 RNA5SP242-201ENST00000364171 118 ntBASIC4.98□□□□□ -1.61
RAE1P78406 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 RNU1-74P-201ENST00000384108 171 ntBASIC4.98□□□□□ -1.61
RAE1P78406 RNU5A-2P-201ENST00000384337 116 ntBASIC4.98□□□□□ -1.61
RAE1P78406 RNU1-149P-201ENST00000390870 161 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 RPL21P67-201ENST00000402896 478 ntBASIC4.98□□□□□ -1.61
RAE1P78406 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.98□□□□□ -1.61
RAE1P78406 SNORA11C-201ENST00000408532 129 ntBASIC4.98□□□□□ -1.61
RAE1P78406 RNA5SP178-201ENST00000410380 128 ntBASIC4.98□□□□□ -1.61
RAE1P78406 RNU6-77P-201ENST00000410554 91 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 RAP1BP1-201ENST00000412709 553 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 AC090960.1-201ENST00000421072 306 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AL133325.1-201ENST00000421090 382 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 CNOT7P1-201ENST00000429006 852 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.98□□□□□ -1.61
RAE1P78406 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 AC073143.1-201ENST00000436316 395 ntBASIC4.98□□□□□ -1.61
RAE1P78406 BX842559.2-201ENST00000451418 605 ntBASIC4.98□□□□□ -1.61
RAE1P78406 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 NECAP1P2-201ENST00000455668 727 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AC245028.2-201ENST00000458673 253 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AC026348.1-201ENST00000462549 1053 ntBASIC4.98□□□□□ -1.61
RAE1P78406 BET1P1-201ENST00000482276 359 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AC073522.1-201ENST00000483312 377 ntBASIC4.98□□□□□ -1.61
RAE1P78406 RN7SL447P-201ENST00000494711 245 ntBASIC4.98□□□□□ -1.61
RAE1P78406 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.98□□□□□ -1.61
RAE1P78406 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.98□□□□□ -1.61
RAE1P78406 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 AC023632.1-201ENST00000518463 375 ntBASIC4.98□□□□□ -1.61
RAE1P78406 IGJP1-201ENST00000522682 475 ntBASIC4.98□□□□□ -1.61
RAE1P78406 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RAE1P78406 PDCL2P2-201ENST00000533651 189 ntBASIC4.98□□□□□ -1.61
RAE1P78406 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 AC125612.1-201ENST00000547580 377 ntBASIC4.98□□□□□ -1.61
RAE1P78406 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.98□□□□□ -1.61
RAE1P78406 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 AC087465.1-201ENST00000560574 245 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 AL021707.7-201ENST00000607991 416 ntBASIC4.98□□□□□ -1.61
RAE1P78406 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.98□□□□□ -1.61
RAE1P78406 AC009318.3-201ENST00000616916 503 ntBASIC4.98□□□□□ -1.61
RAE1P78406 AC007490.1-201ENST00000624321 703 ntBASIC4.98□□□□□ -1.61
RAE1P78406 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 CYP4F35P-202ENST00000636121 390 ntBASIC4.98□□□□□ -1.61
RAE1P78406 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RAE1P78406 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RAE1P78406 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.98□□□□□ -1.61
RAE1P78406 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 AC092747.4-201ENST00000620519 1861 ntBASIC4.98□□□□□ -1.61
RAE1P78406 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAE1P78406 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 CASC19-206ENST00000641028 1430 ntBASIC4.97□□□□□ -1.61
RAE1P78406 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms