Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PKNOX1P55347 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PKNOX1P55347 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PKNOX1P55347 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PKNOX1P55347 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
PKNOX1P55347 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.39□□□□□ -1.71
PKNOX1P55347 AC010132.2-201ENST00000295493 1043 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 RNU6-618P-201ENST00000363518 112 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 OR1F12-201ENST00000402365 945 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.39□□□□□ -1.71
PKNOX1P55347 DHFRP5-201ENST00000406944 564 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL160275.2-201ENST00000412010 394 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AC244453.4-201ENST00000419150 388 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL590609.2-201ENST00000421430 368 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AJ239321.1-201ENST00000424255 564 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 DYNLL1P7-201ENST00000429273 258 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 CDY14P-201ENST00000431260 1014 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL627308.1-201ENST00000435693 821 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.39□□□□□ -1.71
PKNOX1P55347 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.39□□□□□ -1.71
PKNOX1P55347 CDY12P-201ENST00000440679 1015 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
PKNOX1P55347 CDY13P-201ENST00000445813 1015 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 RAD1P2-201ENST00000446414 663 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL035551.1-201ENST00000446931 348 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 CDY23P-201ENST00000451661 1014 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.39□□□□□ -1.71
PKNOX1P55347 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.39□□□□□ -1.71
PKNOX1P55347 MTND4LP2-201ENST00000502312 285 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.39□□□□□ -1.71
PKNOX1P55347 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.39□□□□□ -1.71
PKNOX1P55347 AP000676.2-201ENST00000529711 301 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.39□□□□□ -1.71
PKNOX1P55347 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.39□□□□□ -1.71
PKNOX1P55347 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.39□□□□□ -1.71
PKNOX1P55347 AC098935.2-201ENST00000604222 466 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AC005084.1-201ENST00000605160 304 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL445222.1-201ENST00000607259 628 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AL138721.1-201ENST00000616756 179 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AC009237.17-201ENST00000618111 748 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 AC132825.1-201ENST00000463573 2247 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.39□□□□□ -1.71
PKNOX1P55347 CPHL1P-201ENST00000461341 3407 ntBASIC4.39□□□□□ -1.71
PKNOX1P55347 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PKNOX1P55347 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PKNOX1P55347 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.39□□□□□ -1.71
PKNOX1P55347 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PKNOX1P55347 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.38□□□□□ -1.71
PKNOX1P55347 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PKNOX1P55347 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PKNOX1P55347 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PKNOX1P55347 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PKNOX1P55347 RNA5SP307-201ENST00000362863 116 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.38□□□□□ -1.71
PKNOX1P55347 MIR513A2-201ENST00000385249 127 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.38□□□□□ -1.71
PKNOX1P55347 MIR1178-201ENST00000408396 91 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 RNU6-564P-201ENST00000410983 104 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 SNORA74C-2-201ENST00000411179 201 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC092570.3-201ENST00000420113 693 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 BX510359.3-201ENST00000422168 306 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 NPM1P26-201ENST00000426339 738 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 XKRYP6-201ENST00000440468 1116 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 XKRYP3-201ENST00000442113 1116 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 RPL31P44-201ENST00000447680 377 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 RPL31P20-201ENST00000449593 360 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 DDX39BP2-208ENST00000453923 258 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC010469.1-201ENST00000463864 576 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 RPL5P30-201ENST00000465511 891 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AC006967.1-201ENST00000467608 589 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC037198.2-201ENST00000478845 733 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 RN7SL808P-201ENST00000496066 299 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 OR52A4P-203ENST00000498233 1014 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 OR8X1P-201ENST00000534542 869 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.38□□□□□ -1.71
PKNOX1P55347 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.38□□□□□ -1.71
PKNOX1P55347 MIR4646-201ENST00000580775 63 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 MIR4737-201ENST00000583979 81 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AC020915.5-201ENST00000596836 964 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC073091.2-201ENST00000603205 907 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AL031320.1-201ENST00000604177 357 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AL133338.2-201ENST00000604292 736 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AC023813.4-201ENST00000607580 580 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AC016769.4-201ENST00000616893 535 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 AL356274.1-201ENST00000617064 410 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PKNOX1P55347 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PKNOX1P55347 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms