Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 ERLEC1P1-201ENST00000433806 578 ntBASIC8.16□□□□□ -1.1
PTPREP23469 RPL7P29-201ENST00000437151 728 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC009237.3-203ENST00000442128 3551 ntBASIC8.16□□□□□ -1.1
PTPREP23469 GAPDHP23-201ENST00000444823 993 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPREP23469 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPREP23469 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 RPL7P52-201ENST00000449200 742 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 AL445991.1-201ENST00000450381 475 ntBASIC8.16□□□□□ -1.1
PTPREP23469 MTND3P16-201ENST00000452205 344 ntBASIC8.16□□□□□ -1.1
PTPREP23469 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.16□□□□□ -1.1
PTPREP23469 Y_RNA.653-201ENST00000459091 95 ntBASIC8.16□□□□□ -1.1
PTPREP23469 MIR2053-201ENST00000459295 91 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 Y_RNA.682-201ENST00000516457 100 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.16□□□□□ -1.1
PTPREP23469 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC8.16□□□□□ -1.1
PTPREP23469 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC8.16□□□□□ -1.1
PTPREP23469 AC124068.1-201ENST00000563131 678 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 RNU6-89P-201ENST00000606519 100 ntBASIC8.16□□□□□ -1.1
PTPREP23469 AF287957.1-201ENST00000607368 1595 ntBASIC8.16□□□□□ -1.1
PTPREP23469 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 MIR193BHG-214ENST00000641765 509 ntBASIC8.16□□□□□ -1.1
PTPREP23469 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTPREP23469 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
PTPREP23469 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPREP23469 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 AL121949.2-201ENST00000403446 1548 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AP004289.2-201ENST00000444413 1457 ntBASIC8.15□□□□□ -1.1
PTPREP23469 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PTPREP23469 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.15□□□□□ -1.1
PTPREP23469 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPREP23469 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTPREP23469 Y_RNA.5-201ENST00000362334 102 ntBASIC8.15□□□□□ -1.1
PTPREP23469 MIR621-201ENST00000384919 96 ntBASIC8.15□□□□□ -1.1
PTPREP23469 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PTPREP23469 RN7SKP266-201ENST00000410232 287 ntBASIC8.15□□□□□ -1.1
PTPREP23469 RPL6P29-201ENST00000414863 865 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.15□□□□□ -1.1
PTPREP23469 RBMY2KP-201ENST00000418221 992 ntBASIC8.15□□□□□ -1.1
PTPREP23469 SPATA20P1-201ENST00000423089 438 ntBASIC8.15□□□□□ -1.1
PTPREP23469 ARL5AP4-201ENST00000430731 512 ntBASIC8.15□□□□□ -1.1
PTPREP23469 HMGB3P10-201ENST00000434734 572 ntBASIC8.15□□□□□ -1.1
PTPREP23469 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AL031681.1-201ENST00000443304 400 ntBASIC8.15□□□□□ -1.1
PTPREP23469 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.15□□□□□ -1.1
PTPREP23469 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AC107399.1-201ENST00000451226 265 ntBASIC8.15□□□□□ -1.1
PTPREP23469 RPL30P15-201ENST00000457129 321 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AC019084.1-201ENST00000457337 432 ntBASIC8.15□□□□□ -1.1
PTPREP23469 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.15□□□□□ -1.1
PTPREP23469 RN7SL393P-201ENST00000463588 296 ntBASIC8.15□□□□□ -1.1
PTPREP23469 RN7SL168P-201ENST00000463821 279 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AC097493.1-201ENST00000463958 372 ntBASIC8.15□□□□□ -1.1
PTPREP23469 RN7SL83P-201ENST00000468131 297 ntBASIC8.15□□□□□ -1.1
PTPREP23469 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC8.15□□□□□ -1.1
PTPREP23469 AC116917.1-201ENST00000520558 305 ntBASIC8.15□□□□□ -1.1
PTPREP23469 MRPS16P1-201ENST00000523462 412 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AP002373.2-201ENST00000541631 1060 ntBASIC8.15□□□□□ -1.1
PTPREP23469 POLR2KP1-201ENST00000553226 168 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AL162632.2-201ENST00000553933 399 ntBASIC8.15□□□□□ -1.1
PTPREP23469 RN7SL366P-201ENST00000577957 292 ntBASIC8.15□□□□□ -1.1
PTPREP23469 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.15□□□□□ -1.1
PTPREP23469 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AC107871.2-201ENST00000612894 502 ntBASIC8.15□□□□□ -1.1
PTPREP23469 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AL355810.1-201ENST00000614629 552 ntBASIC8.15□□□□□ -1.1
PTPREP23469 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.15□□□□□ -1.1
PTPREP23469 AC119674.1-212ENST00000641155 993 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms