Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.51□□□□□ -1.85
CCL3L1P16619 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.51□□□□□ -1.85
CCL3L1P16619 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCL3L1P16619 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.51□□□□□ -1.85
CCL3L1P16619 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCL3L1P16619 AC027176.2-201ENST00000559166 746 ntBASIC3.51□□□□□ -1.85
CCL3L1P16619 RN7SL371P-201ENST00000578099 267 ntBASIC3.51□□□□□ -1.85
CCL3L1P16619 AC023575.1-201ENST00000580510 358 ntBASIC3.51□□□□□ -1.85
CCL3L1P16619 KPNA2P3-201ENST00000584190 848 ntBASIC3.51□□□□□ -1.85
CCL3L1P16619 IPO5P1-202ENST00000600039 287 ntBASIC3.51□□□□□ -1.85
CCL3L1P16619 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCL3L1P16619 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.51□□□□□ -1.85
CCL3L1P16619 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCL3L1P16619 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCL3L1P16619 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCL3L1P16619 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCL3L1P16619 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCL3L1P16619 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCL3L1P16619 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 RNA5SP28-201ENST00000363841 119 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 GAPDHP49-201ENST00000421421 961 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.5□□□□□ -1.85
CCL3L1P16619 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.5□□□□□ -1.85
CCL3L1P16619 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCL3L1P16619 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 RPL23AP81-201ENST00000455252 467 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 AC079804.1-201ENST00000461922 436 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 AC083829.1-201ENST00000503756 657 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.5□□□□□ -1.85
CCL3L1P16619 AC108475.1-201ENST00000507880 950 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 PARP4P3-201ENST00000510265 317 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 AC008958.1-201ENST00000511047 682 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.5□□□□□ -1.85
CCL3L1P16619 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.5□□□□□ -1.85
CCL3L1P16619 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.5□□□□□ -1.85
CCL3L1P16619 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 MLECP1-201ENST00000615893 709 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.5□□□□□ -1.85
CCL3L1P16619 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.5□□□□□ -1.85
CCL3L1P16619 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCL3L1P16619 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 AC017104.4-201ENST00000636283 1592 ntBASIC3.5□□□□□ -1.85
CCL3L1P16619 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.5□□□□□ -1.85
CCL3L1P16619 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 MTCO1P7-201ENST00000419523 1542 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCL3L1P16619 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 AC026523.2-201ENST00000625039 7739 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 MIR383-201ENST00000362257 73 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 RNA5SP366-201ENST00000365454 123 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCL3L1P16619 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 AL035696.2-201ENST00000407941 709 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 RN7SKP97-201ENST00000410966 333 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL3L1P16619 AC004690.1-201ENST00000418216 328 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL3L1P16619 RBMY1KP-201ENST00000423480 476 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 C4BPAP2-201ENST00000428434 478 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCL3L1P16619 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC3.49□□□□□ -1.85
CCL3L1P16619 UQCRHP4-201ENST00000471686 272 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 AF213884.1-201ENST00000488102 463 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 AC026979.1-201ENST00000492525 396 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 AL592156.1-201ENST00000508758 304 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL3L1P16619 KCTD9P2-201ENST00000512203 1013 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 RNA5SP73-201ENST00000516744 108 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 MIR3138-201ENST00000585238 82 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCL3L1P16619 MAPK10-304ENST00000641341 3984 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL3L1P16619 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCL3L1P16619 AC099654.3-201ENST00000447087 1546 ntBASIC3.49□□□□□ -1.85
CCL3L1P16619 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCL3L1P16619 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCL3L1P16619 AL449283.1-201ENST00000602631 3403 ntBASIC3.48□□□□□ -1.85
CCL3L1P16619 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms