Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.94□□□□□ -1.46
COL3A1P02461 MTATP6P14-201ENST00000455189 673 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 MTND2P32-201ENST00000521584 1038 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 LRRC34P1-201ENST00000542742 915 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.94□□□□□ -1.46
COL3A1P02461 RPL23AP97-201ENST00000568955 471 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 MIR4284-201ENST00000578924 81 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AC110760.3-201ENST00000598794 467 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.94□□□□□ -1.46
COL3A1P02461 COX6CP4-201ENST00000605798 228 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AP001033.2-201ENST00000609701 1003 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 AL138955.1-201ENST00000622881 1040 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AC013437.2-201ENST00000639587 677 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AC138627.1-204ENST00000641894 765 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.94□□□□□ -1.46
COL3A1P02461 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.93□□□□□ -1.46
COL3A1P02461 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 AC005261.6-201ENST00000623072 1387 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AL137918.1-201ENST00000624542 1922 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 AL136164.3-201ENST00000624429 3978 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
COL3A1P02461 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 RPL32P3-201ENST00000359025 275 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 SNORD96B-201ENST00000386148 79 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 ARAFP1-201ENST00000422172 605 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC012519.1-201ENST00000424588 610 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.93□□□□□ -1.46
COL3A1P02461 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.93□□□□□ -1.46
COL3A1P02461 ELOCP13-201ENST00000443934 329 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.93□□□□□ -1.46
COL3A1P02461 IGBP1P5-201ENST00000507524 1000 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.93□□□□□ -1.46
COL3A1P02461 MTCO1P47-201ENST00000523889 1271 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 MTND2P17-201ENST00000550281 688 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.93□□□□□ -1.46
COL3A1P02461 AC091178.1-203ENST00000584586 279 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.93□□□□□ -1.46
COL3A1P02461 AC020910.2-201ENST00000603635 610 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.93□□□□□ -1.46
COL3A1P02461 AC015802.5-201ENST00000607478 399 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC120053.1-201ENST00000607706 736 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC005962.2-201ENST00000611427 652 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AL353726.1-201ENST00000614041 1000 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC090116.1-201ENST00000615679 446 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC009159.2-201ENST00000617603 606 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.93□□□□□ -1.46
COL3A1P02461 AC022106.2-201ENST00000620114 757 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC010809.3-201ENST00000621310 641 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC005086.4-201ENST00000623065 213 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AC140479.6-201ENST00000633535 357 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.93□□□□□ -1.46
COL3A1P02461 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL3A1P02461 AL603750.1-201ENST00000624216 1717 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.93□□□□□ -1.46
COL3A1P02461 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL3A1P02461 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL3A1P02461 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL3A1P02461 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL3A1P02461 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL3A1P02461 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL3A1P02461 AL359643.1-201ENST00000404109 423 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 FCF1P5-201ENST00000406490 482 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.92□□□□□ -1.46
COL3A1P02461 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.92□□□□□ -1.46
COL3A1P02461 AC073143.1-201ENST00000436316 395 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 UBE2V1P3-201ENST00000439651 417 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 NUTF2P7-201ENST00000453086 375 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 AC109327.1-201ENST00000471666 403 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 AC092902.1-201ENST00000486999 259 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
COL3A1P02461 HPRT1P1-201ENST00000509498 657 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 PGBD4P4-201ENST00000509673 613 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.92□□□□□ -1.46
COL3A1P02461 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.92□□□□□ -1.46
COL3A1P02461 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL3A1P02461 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.92□□□□□ -1.46
COL3A1P02461 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.92□□□□□ -1.46
COL3A1P02461 AC068790.2-201ENST00000602601 557 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 AL049844.2-201ENST00000604280 628 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 CR589904.2-201ENST00000612533 440 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 OR5AC4P-202ENST00000642086 985 ntBASIC5.92□□□□□ -1.46
COL3A1P02461 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL3A1P02461 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL3A1P02461 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
COL3A1P02461 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL3A1P02461 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
COL3A1P02461 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms