Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.01□□□□□ -1.61
O00370 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.01□□□□□ -1.61
O00370 OR8K2P-201ENST00000524645 927 ntBASIC5.01□□□□□ -1.61
O00370 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 GSTP1P1-201ENST00000548078 319 ntBASIC5.01□□□□□ -1.61
O00370 AL110118.1-201ENST00000553543 400 ntBASIC5.01□□□□□ -1.61
O00370 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.01□□□□□ -1.61
O00370 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.01□□□□□ -1.61
O00370 OR4H6P-202ENST00000603819 340 ntBASIC5.01□□□□□ -1.61
O00370 AC233280.2-201ENST00000603917 1070 ntBASIC5.01□□□□□ -1.61
O00370 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.01□□□□□ -1.61
O00370 MIR6853-201ENST00000619642 74 ntBASIC5.01□□□□□ -1.61
O00370 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.01□□□□□ -1.61
O00370 AC092159.4-201ENST00000624944 550 ntBASIC5.01□□□□□ -1.61
O00370 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
O00370 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
O00370 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.01□□□□□ -1.61
O00370 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.01□□□□□ -1.61
O00370 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
O00370 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
O00370 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
O00370 AC108751.5-201ENST00000492880 1336 ntBASIC5□□□□□ -1.61
O00370 NEAT1-202ENST00000501122 22743 ntBASIC5□□□□□ -1.61
O00370 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
O00370 AC007342.7-201ENST00000624610 2337 ntBASIC5□□□□□ -1.61
O00370 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
O00370 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
O00370 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
O00370 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
O00370 AL591848.1-201ENST00000413092 322 ntBASIC5□□□□□ -1.61
O00370 AC009237.10-201ENST00000414112 510 ntBASIC5□□□□□ -1.61
O00370 RBMY2KP-201ENST00000418221 992 ntBASIC5□□□□□ -1.61
O00370 SLC9B1P4-201ENST00000421957 1288 ntBASIC5□□□□□ -1.61
O00370 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5□□□□□ -1.61
O00370 TRAPPC2P5-201ENST00000426293 308 ntBASIC5□□□□□ -1.61
O00370 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5□□□□□ -1.61
O00370 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5□□□□□ -1.61
O00370 MTND2P21-201ENST00000436242 1042 ntBASIC5□□□□□ -1.61
O00370 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5□□□□□ -1.61
O00370 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
O00370 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5□□□□□ -1.61
O00370 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5□□□□□ -1.61
O00370 AC108463.1-201ENST00000450258 347 ntBASIC5□□□□□ -1.61
O00370 AL049829.1-201ENST00000465411 156 ntBASIC5□□□□□ -1.61
O00370 RN7SL817P-201ENST00000480777 288 ntBASIC5□□□□□ -1.61
O00370 RWDD4P1-201ENST00000488019 565 ntBASIC5□□□□□ -1.61
O00370 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5□□□□□ -1.61
O00370 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5□□□□□ -1.61
O00370 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5□□□□□ -1.61
O00370 RNU6-491P-201ENST00000516099 110 ntBASIC5□□□□□ -1.61
O00370 RNU2-30P-201ENST00000516209 141 ntBASIC5□□□□□ -1.61
O00370 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5□□□□□ -1.61
O00370 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5□□□□□ -1.61
O00370 AC040174.2-201ENST00000602701 465 ntBASIC5□□□□□ -1.61
O00370 AC087283.1-201ENST00000604029 1074 ntBASIC5□□□□□ -1.61
O00370 AC073137.1-201ENST00000605636 634 ntBASIC5□□□□□ -1.61
O00370 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5□□□□□ -1.61
O00370 AC091979.2-201ENST00000607514 214 ntBASIC5□□□□□ -1.61
O00370 AP000720.1-201ENST00000625091 483 ntBASIC5□□□□□ -1.61
O00370 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5□□□□□ -1.61
O00370 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5□□□□□ -1.61
O00370 AC120338.1-201ENST00000625074 1541 ntBASIC5□□□□□ -1.61
O00370 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
O00370 AL031119.1-201ENST00000404707 1879 ntBASIC5□□□□□ -1.61
O00370 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
O00370 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5□□□□□ -1.61
O00370 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5□□□□□ -1.61
O00370 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
O00370 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
O00370 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.99□□□□□ -1.61
O00370 AC010928.1-201ENST00000592477 1447 ntBASIC4.99□□□□□ -1.61
O00370 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
O00370 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
O00370 Z95327.2-201ENST00000414579 1873 ntBASIC4.99□□□□□ -1.61
O00370 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
O00370 RNU1-94P-201ENST00000362627 173 ntBASIC4.99□□□□□ -1.61
O00370 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
O00370 SNORD96B-201ENST00000386148 79 ntBASIC4.99□□□□□ -1.61
O00370 UBE2V1P15-201ENST00000407776 448 ntBASIC4.99□□□□□ -1.61
O00370 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.99□□□□□ -1.61
O00370 CEACAMP8-201ENST00000413902 580 ntBASIC4.99□□□□□ -1.61
O00370 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.99□□□□□ -1.61
O00370 AC004448.2-201ENST00000422360 586 ntBASIC4.99□□□□□ -1.61
O00370 USP9YP9-201ENST00000429406 715 ntBASIC4.99□□□□□ -1.61
O00370 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.99□□□□□ -1.61
O00370 AL049745.1-201ENST00000433953 286 ntBASIC4.99□□□□□ -1.61
O00370 AC016831.4-201ENST00000438302 307 ntBASIC4.99□□□□□ -1.61
O00370 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.99□□□□□ -1.61
O00370 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.99□□□□□ -1.61
O00370 MTND6P18-201ENST00000439477 513 ntBASIC4.99□□□□□ -1.61
O00370 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.99□□□□□ -1.61
O00370 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.99□□□□□ -1.61
O00370 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.99□□□□□ -1.61
O00370 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
O00370 CCDC75P1-201ENST00000469247 791 ntBASIC4.99□□□□□ -1.61
O00370 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.99□□□□□ -1.61
O00370 STMN1P2-201ENST00000508435 439 ntBASIC4.99□□□□□ -1.61
O00370 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.99□□□□□ -1.61
O00370 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
O00370 LINC00557-201ENST00000563184 1279 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms