Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AL445213.1-201ENST00000412589 747 ntBASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC104763.1-201ENST00000475274 360 ntBASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 SNRPGP1-201ENST00000553864 222 ntBASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 PSMB7P1-201ENST00000556349 514 ntBASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC087477.6-201ENST00000559595 843 ntBASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 ARF4P1-201ENST00000605447 541 ntBASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.75□□□□□ -1.01
SHROOM4Q9ULL8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC107021.2-201ENST00000567714 2095 ntBASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 BX005214.3-202ENST00000619809 325 ntBASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC015804.1-201ENST00000622935 435 ntBASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 AC090506.2-201ENST00000624521 419 ntBASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
SHROOM4Q9ULL8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 SNORA71.3-201ENST00000362582 128 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 MIR670-201ENST00000390142 98 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AL157884.3-201ENST00000448273 1184 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AC007688.1-201ENST00000475592 759 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AC027216.1-201ENST00000577726 685 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AP001160.4-201ENST00000596971 382 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AL354696.1-201ENST00000614652 497 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 AL627171.1-201ENST00000618845 1308 ntBASIC8.73□□□□□ -1.01
SHROOM4Q9ULL8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 SNORA11.2-201ENST00000408318 127 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 EIF4A1P3-201ENST00000411521 244 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 MTATP6P19-201ENST00000413797 659 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 PCNPP4-201ENST00000414817 517 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 RPL6P5-201ENST00000445678 828 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AL513343.1-201ENST00000451818 792 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 MTND2P3-201ENST00000452458 470 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 RPL23AP2-201ENST00000471227 466 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AP000889.1-201ENST00000530968 660 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 TRAV8-5-201ENST00000537369 341 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 CYCSP40-201ENST00000575927 294 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 AC006453.5-201ENST00000636451 619 ntBASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SHROOM4Q9ULL8 MIR383-201ENST00000362257 73 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 RNU6-883P-201ENST00000384597 107 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 MIR137-201ENST00000385223 102 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 U3.35-201ENST00000408405 208 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 RSL24D1P8-201ENST00000434442 492 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 H2AFZP5-201ENST00000446960 382 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 AC079804.1-201ENST00000461922 436 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 AL049874.2-201ENST00000492636 288 ntBASIC8.71□□□□□ -1.01
SHROOM4Q9ULL8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms