Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL162739.1-201ENST00000450606 307 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL935212.3-201ENST00000450729 284 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC073594.1-201ENST00000462065 364 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC091544.1-201ENST00000484702 348 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 RPL21P42-201ENST00000488408 464 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC012170.1-201ENST00000495139 359 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 MTCYBP17-201ENST00000503579 789 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 IMPA1P1-201ENST00000510718 842 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 Y_RNA.704-201ENST00000516851 102 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 RNU6-1261P-201ENST00000517194 104 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AP001189.2-201ENST00000527320 189 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL157687.1-201ENST00000554853 619 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC092718.4-201ENST00000566639 716 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC091932.1-201ENST00000569381 427 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC137800.2-201ENST00000574375 120 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC005498.1-201ENST00000592125 465 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC079315.1-201ENST00000602952 623 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 SUGT1P3-202ENST00000604259 383 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC115286.1-201ENST00000604298 434 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AP001836.1-201ENST00000604675 523 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC073046.2-201ENST00000604756 527 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC069304.2-201ENST00000605154 435 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 PART1_1.1-201ENST00000611761 217 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 MIR6732-201ENST00000619365 60 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL139089.1-201ENST00000620372 975 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AL445264.1-201ENST00000621719 171 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 FRG1KP-201ENST00000623592 341 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC093591.3-201ENST00000634516 308 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC024614.3-201ENST00000637860 256 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSU72Q9NP77 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 DCAF13P1-201ENST00000495256 1330 ntBASIC6.2□□□□□ -1.42
SSU72Q9NP77 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.2□□□□□ -1.42
SSU72Q9NP77 ZNF402P-201ENST00000404435 3100 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 MT-RNR2-201ENST00000387347 1559 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC006600.2-201ENST00000624834 2506 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 RNU4-73P-201ENST00000363164 141 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 SNORD116-23-201ENST00000384645 92 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 MIR187-201ENST00000385062 109 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 RPS3AP36-201ENST00000398190 775 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 RPS3AP3-201ENST00000411933 242 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 RPS20P15-201ENST00000412792 311 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 HMGB1P11-201ENST00000413899 637 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL354868.1-201ENST00000417077 482 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 RPL18AP14-201ENST00000417685 526 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 BOLA3P4-201ENST00000418151 400 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 LDHAP2-201ENST00000437325 985 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 CR391992.1-201ENST00000438601 394 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 RPL23AP60-201ENST00000450011 454 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 RPL7P48-201ENST00000461513 746 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC087312.1-201ENST00000471411 480 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC104687.1-201ENST00000485829 412 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 RN7SL714P-201ENST00000487050 298 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 RN7SL284P-201ENST00000498823 275 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 TOMM22P4-201ENST00000511318 336 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 SLC2A13P1-201ENST00000531560 322 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC023968.1-201ENST00000560719 475 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms