Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 RNU1-85P-201ENST00000364127 164 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 RNA5SP428-201ENST00000365129 132 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 SNORA37-201ENST00000384504 129 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 MIR134-201ENST00000385258 73 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 SNORA57.1-201ENST00000391227 145 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 QRSL1P2-201ENST00000418582 964 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC004074.1-201ENST00000421810 1063 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 DDX39BP1-205ENST00000422507 192 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC093414.1-201ENST00000434712 514 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 RPL36AP15-201ENST00000444514 266 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 IGHV5-78-201ENST00000450948 295 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC022034.3-201ENST00000471393 478 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC026688.1-201ENST00000520639 1168 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 HMGB3P26-201ENST00000560051 582 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 KPNA2P3-201ENST00000584190 848 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC020915.5-201ENST00000596836 964 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AL139395.1-201ENST00000603662 160 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AL391358.1-201ENST00000605342 190 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC078899.5-201ENST00000612475 178 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM4Q9C037 AC139713.2-214ENST00000642059 1811 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 KARSP3-201ENST00000571212 1504 ntBASIC4.72□□□□□ -1.65
TRIM4Q9C037 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM4Q9C037 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM4Q9C037 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.71□□□□□ -1.65
TRIM4Q9C037 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM4Q9C037 RNA5SP52-201ENST00000362448 134 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM4Q9C037 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM4Q9C037 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 RN7SKP263-201ENST00000411194 309 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AL389915.1-201ENST00000422463 466 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 SKP1P3-201ENST00000429280 487 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 PPIAP13-201ENST00000434706 478 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 MRPL48P1-201ENST00000445390 636 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC004980.3-201ENST00000447046 365 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 TCEA1P1-201ENST00000449716 880 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AK3P4-201ENST00000504283 583 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 IGLVIV-53-201ENST00000520107 367 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC008126.1-201ENST00000549019 480 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC105254.2-201ENST00000603636 436 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 MAPK10-263ENST00000641052 4307 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM4Q9C037 DHX9P1-201ENST00000436565 3076 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AC074029.4-201ENST00000624796 1859 ntBASIC4.71□□□□□ -1.66
TRIM4Q9C037 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM4Q9C037 AL132640.2-201ENST00000559968 1698 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 A2MP1-204ENST00000566278 4130 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 RPL17P50-201ENST00000396131 546 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AP002530.1-201ENST00000405705 684 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AL451062.2-201ENST00000427515 271 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 SCAND3P1-201ENST00000439854 1060 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC104971.1-201ENST00000495117 578 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC010350.1-201ENST00000504908 231 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AL121834.1-201ENST00000572284 509 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms