Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 RPL12P28-201ENST00000430852 489 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC092170.1-201ENST00000440211 356 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC244505.3-201ENST00000454598 187 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC108161.1-201ENST00000461060 402 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC016559.2-201ENST00000510759 359 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC023538.1-201ENST00000534576 736 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 ATP5F1P7-201ENST00000567330 760 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC245036.5-201ENST00000596330 847 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 GAS5-AS1-201ENST00000602767 694 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 IMMP1LP3-201ENST00000604197 224 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC025811.1-201ENST00000604312 472 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC013468.1-201ENST00000608680 598 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC118658.2-201ENST00000618697 459 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 AC123767.1-202ENST00000620407 817 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 SMG1P4-204ENST00000523028 4131 ntBASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP3Q96JB5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC006210.2-201ENST00000367074 1545 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 RNU6-224P-201ENST00000384055 107 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 MIR513B-201ENST00000385136 84 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL035419.1-201ENST00000397037 564 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL391361.1-201ENST00000405580 489 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 BTF3P8-201ENST00000414577 526 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 SLC35E1P1-201ENST00000419313 864 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 OR2X1P-201ENST00000421144 687 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC079355.1-201ENST00000421770 223 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL354710.1-201ENST00000453641 246 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC011225.1-201ENST00000457751 369 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 RN7SL515P-201ENST00000463999 297 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC093534.1-201ENST00000504977 132 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 PGAM1P13-201ENST00000507497 754 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC004825.1-201ENST00000555068 586 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 SETP1-201ENST00000556014 845 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 NPM1P47-201ENST00000560843 856 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 NIFKP6-201ENST00000598115 845 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC007342.8-201ENST00000623278 678 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 AC068057.2-201ENST00000624047 895 ntBASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP3Q96JB5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 GTF2H2B-203ENST00000508065 1432 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 ANKRD36P1-201ENST00000344424 659 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms