Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CDY14P-201ENST00000431260 1014 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 RHOT1P3-201ENST00000436571 331 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CDY12P-201ENST00000440679 1015 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CDY13P-201ENST00000445813 1015 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CDY23P-201ENST00000451661 1014 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 RPS29P33-201ENST00000456717 146 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 IGLV2-34-201ENST00000490007 283 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 OR51K1P-201ENST00000510214 950 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 SCARNA20.4-201ENST00000516969 131 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC023824.3-201ENST00000569003 562 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AL627230.1-201ENST00000613077 211 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AL591926.8-201ENST00000616876 211 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 uc_338.7-201ENST00000621834 124 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC099654.6-201ENST00000636487 512 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 BX649567.1-201ENST00000642071 1134 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC100871.1-201ENST00000507871 1456 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 RNU6-549P-201ENST00000384433 107 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 ADAM24P-201ENST00000398655 2101 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 PPIAP9-201ENST00000403866 498 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AP002530.1-201ENST00000405705 684 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 RN7SKP114-201ENST00000410327 279 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 TAF13P2-201ENST00000416876 286 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 OR5M12P-201ENST00000423388 929 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL935212.3-201ENST00000450729 284 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC092155.2-201ENST00000454675 477 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 HMGB1P4-201ENST00000455362 567 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL139824.2-201ENST00000458731 1095 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC079203.1-201ENST00000487972 404 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC005412.2-201ENST00000492004 341 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC008897.1-201ENST00000494006 347 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC140172.1-201ENST00000502928 141 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC104108.1-201ENST00000509930 412 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 BTF3P13-201ENST00000513224 490 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 RNU6-311P-201ENST00000516224 102 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC021006.3-201ENST00000530771 192 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC063949.1-201ENST00000552900 865 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC234772.3-201ENST00000602277 528 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL022394.1-201ENST00000606979 292 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms