Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNE4Q8N205 AC009501.3-201ENST00000605001 1352 ntBASIC6.15□□□□□ -1.43
SYNE4Q8N205 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE4Q8N205 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE4Q8N205 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SYNE4Q8N205 CASC19-260ENST00000641828 2001 ntBASIC6.15□□□□□ -1.43
SYNE4Q8N205 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC139713.2-214ENST00000642059 1811 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 RN7SKP16-201ENST00000410180 299 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 RN7SKP106-201ENST00000410832 272 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 RAB9AP4-201ENST00000415230 609 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AL031779.1-201ENST00000415663 330 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 COX6CP13-201ENST00000428703 226 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 NDUFA5P10-201ENST00000432147 357 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 ZNF965P-201ENST00000432501 817 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 ATP5C1P1-201ENST00000441945 895 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 KATNBL1P3-201ENST00000443475 909 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 RPL10P17-201ENST00000453852 316 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC091180.1-201ENST00000462104 372 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 RPL7AP28-201ENST00000464513 571 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 RN7SL441P-201ENST00000492388 296 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 RNU6-1334P-201ENST00000516032 105 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC026741.1-201ENST00000605892 482 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC025016.1-201ENST00000616746 682 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC091304.6-201ENST00000619761 202 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 AC078883.4-201ENST00000623218 367 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 MIR6830-201ENST00000636015 70 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 MTND4P4-201ENST00000439033 1366 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 MTND4P8-201ENST00000514997 1362 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 MSL3P1-202ENST00000440028 1468 ntBASIC6.14□□□□□ -1.43
SYNE4Q8N205 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SYNE4Q8N205 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE4Q8N205 SMG1P7-201ENST00000565246 2704 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 MAPK10-338ENST00000641647 3362 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 OR4K15-201ENST00000305051 1216 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 RN7SKP227-201ENST00000364445 330 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 RNU6-316P-201ENST00000391027 107 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 SNORA48.7-201ENST00000391302 135 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 SEPT7P8-201ENST00000413308 775 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 AC010468.1-201ENST00000461022 817 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SYNE4Q8N205 PRDX3P4-201ENST00000470828 747 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 AC105918.1-201ENST00000474399 838 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 NIFKP7-201ENST00000503365 834 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 HMGB1P47-201ENST00000511281 589 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 Y_RNA.655-201ENST00000515919 96 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 RNU6-311P-201ENST00000516224 102 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 MRPS36P3-201ENST00000519284 130 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 AP003080.1-202ENST00000526526 915 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 MTND3P13-201ENST00000574391 343 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 MTCYBP33-201ENST00000575007 1130 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.13□□□□□ -1.43
SYNE4Q8N205 AL022067.1-201ENST00000602426 454 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 AC093765.1-201ENST00000603758 881 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 AC004775.1-201ENST00000607389 753 ntBASIC6.13□□□□□ -1.43
SYNE4Q8N205 AP005229.2-201ENST00000609980 697 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms