Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 NMNAT1P1-201ENST00000554095 876 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC067805.1-201ENST00000559344 470 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC124068.1-201ENST00000563131 678 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 MTCO2P22-201ENST00000603246 681 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC025946.2-201ENST00000603398 234 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AL512329.2-201ENST00000607350 548 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC126915.2-201ENST00000610957 190 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AL359715.5-201ENST00000623431 443 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 AL139254.3-201ENST00000641097 674 ntBASIC3.47□□□□□ -1.85
HLA-DQA1P01909 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1P01909 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
HLA-DQA1P01909 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HLA-DQA1P01909 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 LINC02471-203ENST00000641941 4752 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL031119.1-201ENST00000404707 1879 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 MAPK10-373ENST00000641983 6772 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL391361.1-201ENST00000405580 489 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 FCF1P5-201ENST00000406490 482 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 EIF4A1P3-201ENST00000411521 244 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 TBCAP2-201ENST00000416175 326 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC092647.1-201ENST00000420654 287 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 GAPDHP49-201ENST00000421421 961 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 MTND2P2-201ENST00000434633 945 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 MRPS33P4-201ENST00000434892 317 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL133477.1-201ENST00000457472 514 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC009127.1-201ENST00000467090 155 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC092905.1-201ENST00000467527 949 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC034244.2-201ENST00000514668 858 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 MTCYBP19-201ENST00000517463 1124 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 IGLV2-28-201ENST00000520681 304 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC107016.1-201ENST00000550463 337 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC074029.2-201ENST00000551045 634 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL121932.1-201ENST00000605542 214 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC010424.2-201ENST00000607594 443 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL359513.1-201ENST00000614364 557 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC004808.2-201ENST00000627965 773 ntBASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1P01909 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC018555.1-201ENST00000567548 1980 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC019155.1-201ENST00000382242 574 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 MIR223-201ENST00000385204 110 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AC092642.1-201ENST00000392417 425 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 AL034374.1-201ENST00000406329 351 ntBASIC3.45□□□□□ -1.86
HLA-DQA1P01909 MIR1286-201ENST00000408112 78 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms