Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 BUD31P1-201ENST00000521828 359 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC188H7C350 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC188H7C350 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 RN7SL802P-201ENST00000577858 299 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 MIR5699-201ENST00000578903 90 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AC008759.1-201ENST00000589783 983 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 AC008966.2-201ENST00000606157 453 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC188H7C350 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC188H7C350 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 IRF5P1-201ENST00000504852 2164 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC188H7C350 BX005019.1-201ENST00000561881 1810 ntBASIC4.9□□□□□ -1.62
CCDC188H7C350 CASC19-204ENST00000641001 2055 ntBASIC4.9□□□□□ -1.62
CCDC188H7C350 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CCDC188H7C350 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC188H7C350 RNA5SP455-201ENST00000365190 119 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC188H7C350 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AC093719.1-202ENST00000392735 373 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC188H7C350 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC188H7C350 U3.36-201ENST00000408418 213 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC114755.2-201ENST00000413520 361 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 BMS1P13-201ENST00000417301 885 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 TRGV6-201ENST00000417928 299 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 CFL1P1-202ENST00000432948 411 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AL035458.1-201ENST00000433096 585 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC188H7C350 RHOT1P3-201ENST00000436571 331 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC245047.2-201ENST00000441060 530 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC188H7C350 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC188H7C350 SNRPCP2-201ENST00000504370 475 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 SNORA26.10-201ENST00000516427 141 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AC100770.1-201ENST00000532310 322 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 GLRXP2-201ENST00000555594 321 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AC084759.1-201ENST00000561168 290 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 MIR4443-201ENST00000585052 53 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC188H7C350 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 MEMO1P5-201ENST00000604810 406 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC007497.1-201ENST00000610421 561 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 MIR6768-201ENST00000610734 72 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AC004477.3-201ENST00000614061 590 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AL445493.3-201ENST00000619568 477 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 MIR6886-201ENST00000619864 61 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC007342.8-201ENST00000623278 678 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC188H7C350 FRG1DP-201ENST00000635586 771 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
CCDC188H7C350 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC188H7C350 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC188H7C350 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC188H7C350 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC188H7C350 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC188H7C350 AP000756.2-201ENST00000624168 2567 ntBASIC4.9□□□□□ -1.63
CCDC188H7C350 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC188H7C350 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC188H7C350 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CCDC188H7C350 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
CCDC188H7C350 AC099654.2-201ENST00000433031 1980 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC188H7C350 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC188H7C350 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC188H7C350 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC188H7C350 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC188H7C350 SLC25A18P1-201ENST00000449385 454 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AL591623.2-201ENST00000449978 222 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 CYCSP53-201ENST00000455540 265 ntBASIC4.89□□□□□ -1.63
CCDC188H7C350 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms