Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 OR11H4-201ENST00000315409 1082 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 U3.23-201ENST00000391132 200 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL359715.1-201ENST00000404330 555 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 BMS1P19-201ENST00000433925 393 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 GAPDHP59-201ENST00000435908 267 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 SKP1P1-201ENST00000438081 489 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL049734.2-201ENST00000441066 616 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RN7SL177P-201ENST00000476596 299 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC124945.1-201ENST00000485133 188 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RN7SL362P-201ENST00000494228 267 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC024558.1-201ENST00000505008 528 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC025674.1-201ENST00000507074 324 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC138409.2-202ENST00000507274 458 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RNA5SP401-201ENST00000515920 127 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RNU6-1314P-201ENST00000517139 104 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 IGLC4-201ENST00000517690 248 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC104986.1-201ENST00000517978 436 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 SNORA70D-201ENST00000578836 135 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC087575.1-201ENST00000585087 229 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC011447.2-201ENST00000592921 283 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC063977.7-201ENST00000594454 337 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL138895.2-201ENST00000603019 178 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC104785.1-201ENST00000603220 588 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC004241.2-201ENST00000614562 444 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AP005212.3-201ENST00000619964 528 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC024023.1-201ENST00000624530 922 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RIOK3P1-201ENST00000418778 1528 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AC102941.1-201ENST00000567616 1537 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AL359263.1-201ENST00000441188 2796 ntBASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.11□□□□□ -1.11
HPS5Q9UPZ3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC004014.2-201ENST00000623718 5122 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 OR5BR1P-201ENST00000524992 1330 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 BRD7P1-201ENST00000557705 1915 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 Y_RNA.176-201ENST00000363815 109 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RN7SKP69-201ENST00000365390 305 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RPS4XP8-201ENST00000402039 771 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 MTCO2P33-201ENST00000402100 465 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RPL12P12-201ENST00000424633 501 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 NIPA2P1-201ENST00000426223 976 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC091390.2-201ENST00000432573 374 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC012512.1-201ENST00000446594 718 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC099563.1-201ENST00000456086 418 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RNA5SP216-201ENST00000516111 123 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 RN7SKP196-201ENST00000516267 345 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC008429.4-201ENST00000521201 182 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC083923.1-201ENST00000523708 376 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC023968.1-201ENST00000560719 475 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC018558.5-201ENST00000565840 952 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC141257.3-201ENST00000572906 215 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 HMGN1P30-201ENST00000589286 268 ntBASIC8.1□□□□□ -1.11
HPS5Q9UPZ3 AC010525.2-201ENST00000590920 195 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms