Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR4675-201ENST00000577898 77 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 MIR4691-201ENST00000583764 85 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AC013468.1-201ENST00000608680 598 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AL049539.1-201ENST00000611964 459 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AC100827.5-201ENST00000615883 426 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 STMN1P1-201ENST00000617809 440 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AC006386.1-201ENST00000619436 415 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 uc_338.7-201ENST00000621834 124 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NUP88Q99567 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP88Q99567 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP88Q99567 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NUP88Q99567 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP88Q99567 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 ANKRD36P1-201ENST00000344424 659 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 SNORD116-12-201ENST00000384468 92 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP88Q99567 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP88Q99567 RBMY2KP-201ENST00000418221 992 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP88Q99567 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP88Q99567 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP88Q99567 PTGES3P1-201ENST00000439531 483 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 AC244505.3-201ENST00000454598 187 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC097484.1-201ENST00000471148 389 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC068587.2-201ENST00000478386 781 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 RPL7P41-201ENST00000485823 957 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 IGLV2-34-201ENST00000490007 283 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP88Q99567 PRELID3BP5-201ENST00000508612 460 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP88Q99567 IGKV2D-10-201ENST00000520194 281 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP88Q99567 AP001922.4-201ENST00000526967 290 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 OR8I1P-201ENST00000529291 931 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 OR5D15P-201ENST00000531671 942 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP88Q99567 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP88Q99567 AC023824.3-201ENST00000569003 562 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 ZNF92P3-201ENST00000596594 954 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC125494.2-201ENST00000602431 657 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC087783.2-201ENST00000605070 562 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AL136295.6-201ENST00000610486 658 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC009464.1-201ENST00000615731 469 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AP000676.4-201ENST00000624659 623 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC135068.12-201ENST00000637370 931 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AP005435.3-201ENST00000531260 3198 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 AC007996.1-201ENST00000620414 2821 ntBASIC6.04□□□□□ -1.44
NUP88Q99567 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
NUP88Q99567 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NUP88Q99567 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP88Q99567 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP88Q99567 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP88Q99567 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP88Q99567 AL137100.1-201ENST00000556703 1620 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 THAP12P4-201ENST00000528321 2266 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP88Q99567 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP88Q99567 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NUP88Q99567 AL133270.1-201ENST00000402635 279 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 GTF2IP2-201ENST00000424290 697 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 YWHAEP5-201ENST00000431545 765 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 PTGES3P5-201ENST00000455109 434 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AC096992.1-201ENST00000459808 709 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 HMGN2P25-201ENST00000486956 268 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC119751.1-201ENST00000513357 765 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AC108471.1-201ENST00000513977 287 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.03□□□□□ -1.44
NUP88Q99567 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.03□□□□□ -1.44
NUP88Q99567 OR7E128P-201ENST00000532736 1024 ntBASIC6.03□□□□□ -1.44
NUP88Q99567 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP88Q99567 LRRC34P1-201ENST00000542742 915 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms