Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 MIR195-201ENST00000385194 87 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 HSPD1P16-201ENST00000402302 394 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 RNU2-50P-201ENST00000410494 143 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 LYPLA1P1-201ENST00000434514 622 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 MTND4LP12-201ENST00000448237 295 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AL162591.2-201ENST00000449634 317 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AL162388.1-201ENST00000450912 352 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 IGLV2-34-201ENST00000490007 283 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AC231760.1-201ENST00000498002 260 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 RN7SL176P-201ENST00000580352 264 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 BPIFA4P-203ENST00000603168 689 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AC079298.2-201ENST00000623885 459 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 LINC00622-201ENST00000562811 1570 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 CPHL1P-201ENST00000461341 3407 ntBASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 NXPH1-205ENST00000602349 1953 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC139769.1-204ENST00000472297 1931 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 RNU1-94P-201ENST00000362627 173 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 SEPT7P8-201ENST00000413308 775 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC062016.2-201ENST00000420950 676 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 CEACAMP6-201ENST00000452007 574 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 OR52Y1P-201ENST00000452418 828 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 FGF7P3-201ENST00000454645 303 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AGGF1P3-201ENST00000493675 1213 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 PPM1AP1-201ENST00000502740 1135 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC103792.1-201ENST00000603591 919 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC023813.4-201ENST00000607580 580 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AL161616.1-201ENST00000611867 286 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 MIR6780A-201ENST00000615089 68 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC100827.5-201ENST00000615883 426 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 LINC01808-202ENST00000641680 1116 ntBASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC65Q8IXS2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 SNORD113.2-201ENST00000364166 89 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 RNA5SP151-201ENST00000365632 117 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 RNU1-63P-201ENST00000383902 164 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 SNORA70F-201ENST00000384142 135 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 NCSTNP1-201ENST00000406229 144 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 RBMY2KP-201ENST00000418221 992 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 AC012671.1-201ENST00000451912 203 ntBASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC65Q8IXS2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms