Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZNF137P-201ENST00000456718 1920 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 RNA5SP52-201ENST00000362448 134 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 RNA5SP191-201ENST00000362585 102 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 RN7SKP149-201ENST00000363008 344 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 AL607077.1-201ENST00000401718 499 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.43□□□□□ -1.7
PKNOX1P55347 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.43□□□□□ -1.7
PKNOX1P55347 RN7SKP100-201ENST00000411258 284 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 GSTM3P2-201ENST00000412746 530 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.43□□□□□ -1.7
PKNOX1P55347 UBTFL3-201ENST00000418934 1024 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.43□□□□□ -1.7
PKNOX1P55347 AC005154.2-201ENST00000438110 379 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AP000936.3-201ENST00000438127 255 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.43□□□□□ -1.7
PKNOX1P55347 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.43□□□□□ -1.7
PKNOX1P55347 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.43□□□□□ -1.7
PKNOX1P55347 UBTFL6-201ENST00000477929 1024 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC008897.1-201ENST00000494006 347 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.43□□□□□ -1.7
PKNOX1P55347 PPBPP1-201ENST00000510807 373 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 RNU6-319P-201ENST00000516025 108 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 RN7SKP276-201ENST00000516242 268 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 SCARNA21.2-201ENST00000516600 166 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.43□□□□□ -1.7
PKNOX1P55347 NPM1P6-201ENST00000521088 871 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 SOX5P1-201ENST00000524155 1127 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.43□□□□□ -1.7
PKNOX1P55347 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.43□□□□□ -1.7
PKNOX1P55347 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.43□□□□□ -1.7
PKNOX1P55347 BNIP3P7-201ENST00000605641 516 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.43□□□□□ -1.7
PKNOX1P55347 AP002360.3-201ENST00000607673 710 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.43□□□□□ -1.7
PKNOX1P55347 AL023881.1-201ENST00000621088 301 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PKNOX1P55347 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.43□□□□□ -1.7
PKNOX1P55347 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 AC087190.4-201ENST00000574616 8334 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 AC027290.2-201ENST00000623210 18662 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.43□□□□□ -1.7
PKNOX1P55347 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PKNOX1P55347 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PKNOX1P55347 AC087565.3-202ENST00000642085 1603 ntBASIC4.43□□□□□ -1.7
PKNOX1P55347 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 KARSP3-201ENST00000571212 1504 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.42□□□□□ -1.7
PKNOX1P55347 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PKNOX1P55347 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC067945.1-201ENST00000342609 618 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 SNORA71.2-201ENST00000364941 134 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RNA5SP22-201ENST00000365393 109 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PKNOX1P55347 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC019155.1-201ENST00000382242 574 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RNU1-44P-201ENST00000384453 163 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RN7SKP229-201ENST00000410465 302 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RN7SKP216-201ENST00000411050 312 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RAD23BP1-201ENST00000421404 1227 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.42□□□□□ -1.7
PKNOX1P55347 RPL7P33-201ENST00000444159 742 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC063943.1-201ENST00000465434 453 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC092905.1-201ENST00000467527 949 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RN7SL629P-201ENST00000489622 285 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 UBA52P3-201ENST00000491303 382 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC007016.1-201ENST00000512110 244 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC110775.1-201ENST00000513721 462 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 RNU6-551P-201ENST00000516661 103 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC008694.2-201ENST00000517591 306 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 SEC11B-201ENST00000518383 499 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.42□□□□□ -1.7
PKNOX1P55347 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.42□□□□□ -1.7
PKNOX1P55347 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.42□□□□□ -1.7
PKNOX1P55347 RPL26P30-202ENST00000602923 645 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 BPIFA4P-203ENST00000603168 689 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.42□□□□□ -1.7
PKNOX1P55347 AC108467.2-201ENST00000617640 1597 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC087385.3-201ENST00000620477 187 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC068870.2-201ENST00000620635 389 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC093535.2-201ENST00000624769 2326 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PKNOX1P55347 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms