Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 OR2W4P-201ENST00000406496 926 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 RNU4-64P-201ENST00000410795 131 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 OR6E1P-201ENST00000414424 923 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AC023128.2-201ENST00000420880 1223 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AL139421.1-201ENST00000423010 169 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.09□□□□□ -1.43
EPHB3P54753 ARAFP2-201ENST00000440565 559 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 MTND1P30-201ENST00000441241 901 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 RAB11AP1-201ENST00000442978 646 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.09□□□□□ -1.43
EPHB3P54753 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 RPL38P3-201ENST00000484463 213 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 RPL32P33-201ENST00000487023 394 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC008945.1-201ENST00000505144 499 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.09□□□□□ -1.43
EPHB3P54753 NPM1P21-201ENST00000513394 762 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 RNU6-718P-201ENST00000516166 105 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 DPPA2P4-201ENST00000563717 878 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 MIR4489-201ENST00000578869 62 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.09□□□□□ -1.43
EPHB3P54753 AC018714.1-201ENST00000605028 208 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 AL159169.2-201ENST00000610061 1269 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 MTND5P17-201ENST00000418405 1603 ntBASIC6.09□□□□□ -1.43
EPHB3P54753 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
EPHB3P54753 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.09□□□□□ -1.43
EPHB3P54753 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
EPHB3P54753 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
EPHB3P54753 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.09□□□□□ -1.44
EPHB3P54753 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
EPHB3P54753 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC130304.1-201ENST00000622942 2385 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC011477.1-204ENST00000623416 1325 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC079298.1-201ENST00000625026 1619 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 snoZ40.1-201ENST00000364540 72 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 RN7SKP124-201ENST00000364730 341 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 RNU6-1042P-201ENST00000384204 107 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 SNORD65C-201ENST00000390962 71 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 AL357752.1-201ENST00000412817 349 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AC098592.2-201ENST00000413158 265 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 CBX1P3-201ENST00000413296 527 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 MTND4LP17-201ENST00000414607 293 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AL596448.1-201ENST00000415024 392 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 TCEA1P4-201ENST00000415066 844 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 OR51A5P-201ENST00000415429 942 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC015977.1-201ENST00000418887 292 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB3P54753 AL022400.1-201ENST00000423946 935 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 USP9YP18-201ENST00000425912 695 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 MTCO2P11-201ENST00000431069 680 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 B3GNT2P1-201ENST00000434960 952 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB3P54753 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC112653.1-201ENST00000443851 386 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AL450996.1-201ENST00000445574 1202 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 RN7SL72P-201ENST00000460697 269 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AC110749.1-201ENST00000462007 357 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 RPL35AP19-201ENST00000469425 329 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 OR11I1P-201ENST00000486033 954 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AC009120.1-201ENST00000493458 473 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms