Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 AL353718.1-201ENST00000451028 517 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 CYCSP53-201ENST00000455540 265 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 RN7SL604P-201ENST00000492589 296 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 RNU6-347P-201ENST00000516658 105 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 RNU6-1308P-201ENST00000516817 103 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 NMNAT1P1-201ENST00000554095 876 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 AC023158.1-201ENST00000561632 1025 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 AC021483.2-201ENST00000567415 758 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.04□□□□□ -1.6
LIMK1P53667 CCDC58P3-201ENST00000590792 430 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 BCORP1-203ENST00000513194 5093 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LIMK1P53667 AC104964.3-201ENST00000606115 2860 ntBASIC5.04□□□□□ -1.6
LIMK1P53667 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LIMK1P53667 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LIMK1P53667 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LIMK1P53667 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.04□□□□□ -1.6
LIMK1P53667 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LIMK1P53667 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LIMK1P53667 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
LIMK1P53667 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.03□□□□□ -1.6
LIMK1P53667 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 AL592437.2-201ENST00000421655 2434 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AL132640.2-201ENST00000559968 1698 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 AC092681.1-201ENST00000297369 291 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 SNORA66-201ENST00000384792 133 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 SNORA48.4-201ENST00000391089 134 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 OR8V1P-201ENST00000395193 873 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AC234779.1-201ENST00000425910 285 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 RPL7AP49-201ENST00000429522 581 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AL591438.1-201ENST00000433508 581 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 KCTD10P1-201ENST00000434203 625 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.03□□□□□ -1.6
LIMK1P53667 NPM1P33-201ENST00000438918 872 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 PSMC1P13-201ENST00000458195 985 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 RPL21P129-201ENST00000491732 478 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AC023424.1-201ENST00000496058 459 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 MTND3P24-201ENST00000506306 329 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.03□□□□□ -1.6
LIMK1P53667 AC004923.2-201ENST00000529649 369 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 MIR4277-201ENST00000578298 84 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 MIR3936-201ENST00000584304 110 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.03□□□□□ -1.6
LIMK1P53667 CFTRP2-201ENST00000634304 199 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LIMK1P53667 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 DHX40P1-201ENST00000588725 1412 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LIMK1P53667 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.03□□□□□ -1.6
LIMK1P53667 AC074029.4-201ENST00000624796 1859 ntBASIC5.03□□□□□ -1.6
LIMK1P53667 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LIMK1P53667 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 AC079298.1-201ENST00000625026 1619 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 OR4K15-201ENST00000305051 1216 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 OR52B1P-201ENST00000316506 909 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LIMK1P53667 RNA5SP90-201ENST00000364801 99 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LIMK1P53667 MIR92A2-201ENST00000385299 75 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 SNORA57.1-201ENST00000391227 145 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC073069.1-201ENST00000428657 441 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC016772.1-201ENST00000444170 1261 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AL137845.2-201ENST00000444292 988 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.02□□□□□ -1.61
LIMK1P53667 AC108729.2-201ENST00000476543 840 ntBASIC5.02□□□□□ -1.61
LIMK1P53667 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.02□□□□□ -1.61
LIMK1P53667 RPS27AP16-201ENST00000492222 470 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms