Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL590240.1-201ENST00000334118 313 ntBASIC4.05□□□□□ -1.76
USF1P22415 SNORA70.2-201ENST00000364506 135 ntBASIC4.05□□□□□ -1.76
USF1P22415 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.05□□□□□ -1.76
USF1P22415 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.05□□□□□ -1.76
USF1P22415 RPL23AP4-201ENST00000427757 463 ntBASIC4.05□□□□□ -1.76
USF1P22415 VDAC1P6-201ENST00000430062 855 ntBASIC4.05□□□□□ -1.76
USF1P22415 AC022022.1-201ENST00000430304 178 ntBASIC4.05□□□□□ -1.76
USF1P22415 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.05□□□□□ -1.76
USF1P22415 RPL7AP61-201ENST00000443410 636 ntBASIC4.05□□□□□ -1.76
USF1P22415 ARL2BPP10-201ENST00000446487 531 ntBASIC4.05□□□□□ -1.76
USF1P22415 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.05□□□□□ -1.76
USF1P22415 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.05□□□□□ -1.76
USF1P22415 IGBP1P5-201ENST00000507524 1000 ntBASIC4.05□□□□□ -1.76
USF1P22415 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.05□□□□□ -1.76
USF1P22415 AF186190.1-201ENST00000517470 480 ntBASIC4.05□□□□□ -1.76
USF1P22415 BUD31P1-201ENST00000521828 359 ntBASIC4.05□□□□□ -1.76
USF1P22415 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.05□□□□□ -1.76
USF1P22415 OR8X1P-201ENST00000534542 869 ntBASIC4.05□□□□□ -1.76
USF1P22415 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.05□□□□□ -1.76
USF1P22415 AC133555.2-201ENST00000550213 292 ntBASIC4.05□□□□□ -1.76
USF1P22415 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.05□□□□□ -1.76
USF1P22415 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.05□□□□□ -1.76
USF1P22415 AP005119.2-201ENST00000579735 1105 ntBASIC4.05□□□□□ -1.76
USF1P22415 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.05□□□□□ -1.76
USF1P22415 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.05□□□□□ -1.76
USF1P22415 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.05□□□□□ -1.76
USF1P22415 AL359757.1-201ENST00000623176 255 ntBASIC4.05□□□□□ -1.76
USF1P22415 AP002967.1-201ENST00000624203 539 ntBASIC4.05□□□□□ -1.76
USF1P22415 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.05□□□□□ -1.76
USF1P22415 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USF1P22415 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USF1P22415 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USF1P22415 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USF1P22415 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.05□□□□□ -1.76
USF1P22415 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 VN2R3P-201ENST00000422626 1412 ntBASIC4.04□□□□□ -1.76
USF1P22415 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USF1P22415 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 AC126755.2-208ENST00000327792 462 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC138969.1-213ENST00000331436 462 ntBASIC4.04□□□□□ -1.76
USF1P22415 SNORA73.1-201ENST00000363107 205 ntBASIC4.04□□□□□ -1.76
USF1P22415 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USF1P22415 AL358176.3-201ENST00000420757 454 ntBASIC4.04□□□□□ -1.76
USF1P22415 AL392003.1-201ENST00000434394 243 ntBASIC4.04□□□□□ -1.76
USF1P22415 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.04□□□□□ -1.76
USF1P22415 AL450023.3-201ENST00000440592 271 ntBASIC4.04□□□□□ -1.76
USF1P22415 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.04□□□□□ -1.76
USF1P22415 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USF1P22415 BTF3P6-201ENST00000448054 499 ntBASIC4.04□□□□□ -1.76
USF1P22415 FCF1P7-201ENST00000451185 558 ntBASIC4.04□□□□□ -1.76
USF1P22415 AL356981.1-201ENST00000454879 684 ntBASIC4.04□□□□□ -1.76
USF1P22415 AL672167.3-201ENST00000465951 960 ntBASIC4.04□□□□□ -1.76
USF1P22415 LARP7P4-201ENST00000481075 878 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC026979.1-201ENST00000492525 396 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.04□□□□□ -1.76
USF1P22415 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.04□□□□□ -1.76
USF1P22415 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.04□□□□□ -1.76
USF1P22415 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.04□□□□□ -1.76
USF1P22415 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.04□□□□□ -1.76
USF1P22415 DYNLL1P4-201ENST00000549314 266 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 AL049830.4-201ENST00000555149 351 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 MIR4277-201ENST00000578298 84 ntBASIC4.04□□□□□ -1.76
USF1P22415 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USF1P22415 SS18L2P2-201ENST00000583960 235 ntBASIC4.04□□□□□ -1.76
USF1P22415 MIR4715-201ENST00000584117 79 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC022726.1-201ENST00000587475 207 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC010424.2-201ENST00000607594 443 ntBASIC4.04□□□□□ -1.76
USF1P22415 AC019131.2-201ENST00000609071 870 ntBASIC4.04□□□□□ -1.76
USF1P22415 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.04□□□□□ -1.76
USF1P22415 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USF1P22415 DDX18P3-201ENST00000404856 2007 ntBASIC4.04□□□□□ -1.76
USF1P22415 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.04□□□□□ -1.76
USF1P22415 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.04□□□□□ -1.76
USF1P22415 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
USF1P22415 AL132640.2-201ENST00000559968 1698 ntBASIC4.03□□□□□ -1.76
USF1P22415 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
USF1P22415 AC107027.3-201ENST00000565095 3473 ntBASIC4.03□□□□□ -1.76
USF1P22415 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.03□□□□□ -1.76
USF1P22415 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USF1P22415 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF1P22415 SNORA70F-201ENST00000384142 135 ntBASIC4.03□□□□□ -1.76
USF1P22415 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USF1P22415 AL357515.1-201ENST00000402967 542 ntBASIC4.03□□□□□ -1.76
USF1P22415 CASKP1-201ENST00000412870 582 ntBASIC4.03□□□□□ -1.76
USF1P22415 RSU1P3-201ENST00000412878 835 ntBASIC4.03□□□□□ -1.76
USF1P22415 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms