Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 IGHV5-78-201ENST00000450948 295 ntBASIC4.85□□□□□ -1.63
CDH3P22223 EIF2S2P5-201ENST00000457635 968 ntBASIC4.85□□□□□ -1.63
CDH3P22223 RPL35AP28-201ENST00000459730 331 ntBASIC4.85□□□□□ -1.63
CDH3P22223 OR9N1P-202ENST00000494289 481 ntBASIC4.85□□□□□ -1.63
CDH3P22223 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH3P22223 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH3P22223 RNA5SP43-201ENST00000516559 110 ntBASIC4.85□□□□□ -1.63
CDH3P22223 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CDH3P22223 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH3P22223 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH3P22223 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH3P22223 EIF1P5-201ENST00000585002 234 ntBASIC4.85□□□□□ -1.63
CDH3P22223 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CDH3P22223 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH3P22223 AC005776.1-201ENST00000603164 290 ntBASIC4.85□□□□□ -1.63
CDH3P22223 MEMO1P5-201ENST00000604810 406 ntBASIC4.85□□□□□ -1.63
CDH3P22223 AC135178.6-201ENST00000605314 398 ntBASIC4.85□□□□□ -1.63
CDH3P22223 BX005214.3-202ENST00000619809 325 ntBASIC4.85□□□□□ -1.63
CDH3P22223 AC105105.5-201ENST00000622635 1294 ntBASIC4.85□□□□□ -1.63
CDH3P22223 AC112694.2-201ENST00000623697 768 ntBASIC4.85□□□□□ -1.63
CDH3P22223 AP001784.1-201ENST00000624107 428 ntBASIC4.85□□□□□ -1.63
CDH3P22223 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CDH3P22223 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.85□□□□□ -1.63
CDH3P22223 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CDH3P22223 AC063976.2-201ENST00000425667 3556 ntBASIC4.84□□□□□ -1.63
CDH3P22223 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 AC091046.3-201ENST00000631455 1574 ntBASIC4.84□□□□□ -1.63
CDH3P22223 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH3P22223 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 OR52B1P-201ENST00000316506 909 ntBASIC4.84□□□□□ -1.63
CDH3P22223 RNU1-94P-201ENST00000362627 173 ntBASIC4.84□□□□□ -1.63
CDH3P22223 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 PTGES3P2-201ENST00000407942 482 ntBASIC4.84□□□□□ -1.63
CDH3P22223 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
CDH3P22223 RPL6P29-201ENST00000414863 865 ntBASIC4.84□□□□□ -1.63
CDH3P22223 COX6B1P1-201ENST00000415962 213 ntBASIC4.84□□□□□ -1.63
CDH3P22223 EIF4A1P1-201ENST00000420241 934 ntBASIC4.84□□□□□ -1.63
CDH3P22223 UBE2V1P6-201ENST00000430840 422 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH3P22223 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH3P22223 AL513321.1-201ENST00000441175 761 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC112498.1-201ENST00000444401 332 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH3P22223 MTND2P6-201ENST00000455337 1030 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH3P22223 MTND2P39-201ENST00000457230 764 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC083982.1-201ENST00000485679 344 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH3P22223 AC021146.7-201ENST00000509604 775 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC112206.4-201ENST00000515142 405 ntBASIC4.84□□□□□ -1.63
CDH3P22223 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH3P22223 AC103833.1-201ENST00000517442 172 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH3P22223 BRD9P1-201ENST00000529855 560 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH3P22223 NDUFB4P11-201ENST00000560510 395 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH3P22223 MTCO2P22-201ENST00000603246 681 ntBASIC4.84□□□□□ -1.63
CDH3P22223 AC123786.2-201ENST00000603459 275 ntBASIC4.84□□□□□ -1.63
CDH3P22223 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH3P22223 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH3P22223 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH3P22223 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH3P22223 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDH3P22223 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDH3P22223 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDH3P22223 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CDH3P22223 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CDH3P22223 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH3P22223 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH3P22223 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH3P22223 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH3P22223 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH3P22223 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH3P22223 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
CDH3P22223 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH3P22223 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
CDH3P22223 OR2AM1P-201ENST00000422137 422 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC104837.2-201ENST00000427236 424 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 SDR42E1P3-201ENST00000438345 502 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC006466.1-201ENST00000438721 289 ntBASIC4.83□□□□□ -1.64
CDH3P22223 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH3P22223 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH3P22223 CYCSP34-201ENST00000458172 304 ntBASIC4.83□□□□□ -1.64
CDH3P22223 RPS3AP41-201ENST00000462701 778 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC015908.1-201ENST00000478739 476 ntBASIC4.83□□□□□ -1.64
CDH3P22223 RPS23P1-201ENST00000491662 432 ntBASIC4.83□□□□□ -1.64
CDH3P22223 RPL23AP73-201ENST00000492507 471 ntBASIC4.83□□□□□ -1.64
CDH3P22223 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH3P22223 MTND3P3-201ENST00000505004 126 ntBASIC4.83□□□□□ -1.64
CDH3P22223 AC010468.3-201ENST00000508225 458 ntBASIC4.83□□□□□ -1.64
CDH3P22223 RNU6-1102P-201ENST00000516149 96 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms