Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC007563.3-201ENST00000433233 371 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC016831.4-201ENST00000438302 307 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 BUD31P2-201ENST00000449374 300 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC104629.2-201ENST00000468627 598 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 MTCO3P27-201ENST00000514397 196 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 SNORA70.11-201ENST00000515987 138 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 SNORA70.13-201ENST00000516116 138 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AP001372.4-201ENST00000524889 472 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 C1DP5-201ENST00000525775 383 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC093014.1-201ENST00000548926 724 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC063949.1-201ENST00000552900 865 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AL121594.4-201ENST00000556211 1196 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 MIR1264-201ENST00000616374 69 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC015804.1-201ENST00000622935 435 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC068880.4-201ENST00000623082 495 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC004808.1-201ENST00000627671 721 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 ZFRP1-201ENST00000457579 2970 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC012618.3-205ENST00000637896 1496 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 RBPJP2-201ENST00000618187 1444 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 CASC19-206ENST00000641028 1430 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC079741.1-201ENST00000321498 212 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AL591848.1-201ENST00000413092 322 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 GNG5P5-201ENST00000420444 220 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC004938.1-201ENST00000438468 308 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AL645931.1-201ENST00000439737 410 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC245517.2-201ENST00000442890 346 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC073264.2-201ENST00000448886 166 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC010326.1-201ENST00000462726 602 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 NPM1P17-201ENST00000479221 602 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC007686.1-201ENST00000488511 463 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 COX6B1P2-201ENST00000489624 230 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC016550.3-201ENST00000515706 767 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AP006289.1-201ENST00000538089 277 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 RN7SL652P-201ENST00000577769 300 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 MIR4700-201ENST00000578311 74 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC087283.1-201ENST00000604029 1074 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC073137.1-201ENST00000605636 634 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 MIR8084-201ENST00000614105 89 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC073342.3-201ENST00000624211 193 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AC245100.2-201ENST00000454544 1679 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 AL121950.1-201ENST00000624993 2077 ntBASIC5.07□□□□□ -1.6
SIX4Q9UIU6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX4Q9UIU6 OR9K1P-202ENST00000641111 3217 ntBASIC5.06□□□□□ -1.6
SIX4Q9UIU6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 AL022393.1-201ENST00000625142 1677 ntBASIC5.06□□□□□ -1.6
SIX4Q9UIU6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 RNU6-1000P-201ENST00000391066 106 ntBASIC5.06□□□□□ -1.6
SIX4Q9UIU6 AL049697.2-201ENST00000403708 294 ntBASIC5.06□□□□□ -1.6
SIX4Q9UIU6 AC140479.3-201ENST00000418944 1126 ntBASIC5.06□□□□□ -1.6
SIX4Q9UIU6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX4Q9UIU6 MTCO2P17-201ENST00000424336 677 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms