Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC008758.3-201ENST00000507003 1829 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 RAD1P1-201ENST00000231383 813 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 BMS1P3-201ENST00000372011 932 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 OR13C3-201ENST00000374781 1108 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 SNORA70-201ENST00000384436 135 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 OR51A6P-201ENST00000418680 1004 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 MTCYBP7-201ENST00000419540 1134 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC000111.2-201ENST00000448200 210 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 RPL32P14-201ENST00000463196 378 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC108751.2-201ENST00000469993 231 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 RN7SL319P-201ENST00000480656 221 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC112518.2-201ENST00000508565 425 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC010460.2-201ENST00000509054 677 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC018442.3-201ENST00000523025 183 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 YWHAZP1-201ENST00000556286 722 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC025918.2-201ENST00000558683 763 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC044860.2-201ENST00000561005 179 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 CD24P2-201ENST00000565486 219 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC122134.1-201ENST00000565664 1104 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 TVP23CP2-201ENST00000571473 623 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AL137072.1-201ENST00000603444 466 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 MEMO1P5-201ENST00000604810 406 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AL050303.3-201ENST00000613704 284 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AL158062.1-201ENST00000619632 745 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC012414.7-202ENST00000622705 1090 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AC099654.9-201ENST00000637055 678 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 AL133268.1-201ENST00000405676 1401 ntBASIC5.03□□□□□ -1.6
PCDH9Q9HC56 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH9Q9HC56 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
PCDH9Q9HC56 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AF186996.5-201ENST00000418098 904 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC012519.1-201ENST00000424588 610 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 RBMY2QP-201ENST00000429799 1147 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 PTMAP6-201ENST00000439110 327 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AL353898.1-201ENST00000444055 238 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 OTX2P1-201ENST00000450956 354 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 RPL23AP23-201ENST00000452590 471 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC004453.1-201ENST00000487895 408 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 PPM1AP1-201ENST00000502740 1135 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC021146.7-201ENST00000509604 775 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 DUX4L52-201ENST00000549363 777 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 SETP1-201ENST00000556014 845 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC211433.2-201ENST00000608433 387 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AL121652.1-201ENST00000608851 448 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC090912.3-201ENST00000609775 533 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC097505.1-201ENST00000610199 565 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC004241.3-201ENST00000611728 517 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 485.4 ms