Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC069213.2-201ENST00000420238 366 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 FABP7P2-201ENST00000429946 379 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 OR7L1P-201ENST00000456181 380 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC098799.3-201ENST00000506095 438 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 OR5AN2P-201ENST00000534535 896 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 MIR4330-201ENST00000579077 105 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 FAM60CP-201ENST00000591086 664 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 MIR7703-201ENST00000620784 77 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 U3.53-201ENST00000628922 216 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC090971.4-201ENST00000560291 1800 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AL031119.1-201ENST00000404707 1879 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 MAPK10-286ENST00000641208 8747 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 ATP5F1P2-201ENST00000398143 760 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 EIF4A1P3-201ENST00000411521 244 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 ARAFP1-201ENST00000422172 605 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 RAB28P3-201ENST00000448325 597 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 RPS29P33-201ENST00000456717 146 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 RN7SL738P-201ENST00000470264 297 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 UBA52P3-201ENST00000491303 382 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 MTND4LP2-201ENST00000502312 285 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AL133338.2-201ENST00000604292 736 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 GMCL1P2-201ENST00000605230 823 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 AC004232.3-201ENST00000622977 525 ntBASIC4.79□□□□□ -1.64
RPRD1AQ96P16 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPRD1AQ96P16 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AL022393.1-201ENST00000625142 1677 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 MIR365B-201ENST00000362317 111 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 SNORA70F-201ENST00000384142 135 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 RNA5SP397-201ENST00000391323 118 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 NCSTNP1-201ENST00000406229 144 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC004690.1-201ENST00000418216 328 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC099063.2-201ENST00000446360 662 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC104651.2-201ENST00000447549 528 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 FCF1P7-201ENST00000451185 558 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 NDUFA12P1-201ENST00000455914 406 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC093720.1-201ENST00000505681 714 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AL136295.6-201ENST00000610486 658 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 uc_338.18-201ENST00000615451 175 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC015722.2-201ENST00000622210 551 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC067931.1-201ENST00000624190 671 ntBASIC4.78□□□□□ -1.64
RPRD1AQ96P16 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RPRD1AQ96P16 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms