Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 IL6STP1-201ENST00000346911 1020 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 RPL23AP27-201ENST00000415161 451 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 ATG4AP1-201ENST00000416893 538 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 BX510359.3-201ENST00000422168 306 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 PPIAP13-201ENST00000434706 478 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC097523.2-201ENST00000435551 652 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 OR1H1P-201ENST00000448731 937 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC133473.1-201ENST00000455173 299 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL356390.1-201ENST00000455684 397 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 RPS5P7-201ENST00000456664 608 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 MTND6P6-201ENST00000478031 263 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC025164.1-201ENST00000496249 478 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC021146.3-201ENST00000511911 260 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 RNU2-30P-201ENST00000516209 141 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 SMARCE1P4-201ENST00000523647 241 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC022960.2-201ENST00000616300 666 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC087385.3-201ENST00000620477 187 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.43□□□□□ -1.7
CLHC1Q8NHS4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AP001002.1-201ENST00000625148 1513 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 SNORA51.8-201ENST00000384234 132 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 RNU6-225P-201ENST00000384613 103 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AL356317.1-201ENST00000396110 1436 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 RNU4-34P-201ENST00000410431 124 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 RPSAP41-201ENST00000439695 860 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC110749.1-201ENST00000462007 357 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC063943.1-201ENST00000465434 453 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 DEFB109F-201ENST00000491870 277 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 SCARNA22-201ENST00000503991 125 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC011487.3-201ENST00000593607 453 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 RPL26P30-202ENST00000602923 645 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 OR6R2P-201ENST00000609216 300 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC079298.2-201ENST00000623885 459 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 AC027290.2-201ENST00000623210 18662 ntBASIC4.42□□□□□ -1.7
CLHC1Q8NHS4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 SNORA74A-201ENST00000364089 198 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 MIR921-201ENST00000401133 56 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AL121834.1-202ENST00000404494 277 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 COX6B1P1-201ENST00000415962 213 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 PSMD10P3-201ENST00000437000 448 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 CEACAMP7-201ENST00000444105 496 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 H2AFZP5-201ENST00000446960 382 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC108463.1-201ENST00000450258 347 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.41□□□□□ -1.7
CLHC1Q8NHS4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms