Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-1103P-201ENST00000384150 107 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 Y_RNA.529-201ENST00000384586 119 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 AL390316.1-201ENST00000406279 553 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 FAT1P1-201ENST00000406588 507 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDH1Q08174 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AMD1P2-201ENST00000412936 992 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AL158073.1-201ENST00000426848 1104 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 FCF1P1-201ENST00000432690 571 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 SKP1P1-201ENST00000438081 489 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 AC002504.1-201ENST00000438281 691 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH1Q08174 H3F3AP3-201ENST00000497682 407 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDH1Q08174 POU5F1P7-201ENST00000508759 541 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 MIR4637-201ENST00000582405 84 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 AC067852.5-201ENST00000589299 310 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 NRBF2P5-201ENST00000603087 788 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH1Q08174 PISRT1-201ENST00000626175 531 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 OLMALINC-203ENST00000641087 3779 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 AL121950.1-201ENST00000624993 2077 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH1Q08174 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PCDH1Q08174 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 AC010401.2-201ENST00000575137 4934 ntBASIC6.36□□□□□ -1.39
PCDH1Q08174 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
PCDH1Q08174 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDH1Q08174 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDH1Q08174 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDH1Q08174 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDH1Q08174 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC138915.3-201ENST00000562908 1389 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDH1Q08174 GAPDHP24-201ENST00000328713 983 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
PCDH1Q08174 SNORA63-201ENST00000363450 132 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 RN7SKP118-201ENST00000364331 330 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 RNY4P34-201ENST00000364779 95 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 MRPS6P2-201ENST00000381143 370 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 Y_RNA.548-201ENST00000384656 105 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 MIR506-201ENST00000384998 124 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 FDPSP5-201ENST00000399474 1057 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 RPL7P58-201ENST00000402913 758 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 Y_RNA.608-201ENST00000410647 95 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 RN7SKP222-201ENST00000410651 315 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 USP9YP36-201ENST00000424581 829 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH1Q08174 NPM1P34-201ENST00000428821 893 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 RPL23AP19-201ENST00000436229 369 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 GAPDHP33-201ENST00000443168 1013 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 OR6K1P-201ENST00000456766 971 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 EIF3LP3-201ENST00000495197 822 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC093325.1-201ENST00000508378 326 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AC093809.1-201ENST00000509155 340 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDH1Q08174 SCARNA11.1-201ENST00000516918 132 ntBASIC6.35□□□□□ -1.39
PCDH1Q08174 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDH1Q08174 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms