Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.62□□□□□ -1.83
SSBP1Q04837 EDDM3DP-201ENST00000554692 434 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 AC027176.2-201ENST00000559166 746 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AC141257.3-201ENST00000572906 215 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 MIR3614-201ENST00000581261 86 ntBASIC3.62□□□□□ -1.83
SSBP1Q04837 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP1Q04837 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.62□□□□□ -1.83
SSBP1Q04837 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.62□□□□□ -1.83
SSBP1Q04837 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSBP1Q04837 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSBP1Q04837 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SSBP1Q04837 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP1Q04837 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 RPL23P2-201ENST00000320371 421 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AL138878.1-201ENST00000405131 347 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.61□□□□□ -1.83
SSBP1Q04837 RPS29P14-201ENST00000431518 171 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 AURKAPS1-201ENST00000451805 1212 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC3.61□□□□□ -1.83
SSBP1Q04837 RPL7P22-201ENST00000466005 733 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 RPL35AP15-201ENST00000468042 339 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 RPL31P61-201ENST00000496160 376 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC006499.3-201ENST00000506077 748 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 BTF3P13-201ENST00000513224 490 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 AC005798.1-201ENST00000513715 387 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.61□□□□□ -1.83
SSBP1Q04837 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC021483.2-201ENST00000567415 758 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 AC007599.1-201ENST00000568688 1174 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 OR1F2P-201ENST00000570470 933 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.61□□□□□ -1.83
SSBP1Q04837 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC073091.2-201ENST00000603205 907 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC048341.3-201ENST00000619323 491 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 MIR6853-201ENST00000619642 74 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 AC244205.2-202ENST00000635781 342 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 MIR1910-201ENST00000636955 80 ntBASIC3.61□□□□□ -1.83
SSBP1Q04837 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.61□□□□□ -1.83
SSBP1Q04837 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SSBP1Q04837 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSBP1Q04837 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSBP1Q04837 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.6□□□□□ -1.83
SSBP1Q04837 INTS6P1-201ENST00000504674 2530 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSBP1Q04837 OR11H4-201ENST00000315409 1082 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 RNA5SP175-201ENST00000364275 119 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 RNU4-4P-201ENST00000364588 130 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 SNORA37-201ENST00000384504 129 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC073850.1-201ENST00000449243 255 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 AC053481.1-201ENST00000467217 306 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 RPS26P24-201ENST00000497656 331 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 HIGD1AP14-201ENST00000507617 282 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC010342.1-201ENST00000514047 877 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 RNA5SP143-201ENST00000516936 115 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 NARSP2-201ENST00000518524 679 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.6□□□□□ -1.83
SSBP1Q04837 OR5BC1P-201ENST00000529327 739 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.6□□□□□ -1.83
SSBP1Q04837 NDUFA5P11-201ENST00000567995 343 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.6□□□□□ -1.83
SSBP1Q04837 QTRT1P1-201ENST00000604344 1078 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AL121612.2-201ENST00000612261 482 ntBASIC3.6□□□□□ -1.83
SSBP1Q04837 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SSBP1Q04837 AC007546.1-201ENST00000619452 559 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms