Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.15□□□□□ -1.26
VARSP26640 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.15□□□□□ -1.26
VARSP26640 SAMMSON-203ENST00000641005 2168 ntBASIC7.15□□□□□ -1.26
VARSP26640 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
VARSP26640 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 AC068870.3-201ENST00000625077 2536 ntBASIC7.15□□□□□ -1.26
VARSP26640 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 PPIAP22-201ENST00000358455 498 ntBASIC7.15□□□□□ -1.26
VARSP26640 Y_RNA.187-201ENST00000363918 113 ntBASIC7.15□□□□□ -1.26
VARSP26640 RNU4-20P-201ENST00000365601 151 ntBASIC7.15□□□□□ -1.26
VARSP26640 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
VARSP26640 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.15□□□□□ -1.26
VARSP26640 AC117470.1-201ENST00000381974 330 ntBASIC7.15□□□□□ -1.26
VARSP26640 RNU6-985P-201ENST00000410182 104 ntBASIC7.15□□□□□ -1.26
VARSP26640 RNA5SP498-201ENST00000411342 120 ntBASIC7.15□□□□□ -1.26
VARSP26640 RPSAP1-201ENST00000421328 880 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.15□□□□□ -1.26
VARSP26640 RPL7P4-203ENST00000430239 730 ntBASIC7.15□□□□□ -1.26
VARSP26640 RPS3AP52-201ENST00000435639 297 ntBASIC7.15□□□□□ -1.26
VARSP26640 AL137792.2-201ENST00000443484 235 ntBASIC7.15□□□□□ -1.26
VARSP26640 LIN28AP2-201ENST00000445283 458 ntBASIC7.15□□□□□ -1.26
VARSP26640 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.15□□□□□ -1.26
VARSP26640 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.15□□□□□ -1.26
VARSP26640 AL162395.1-201ENST00000457882 422 ntBASIC7.15□□□□□ -1.26
VARSP26640 RNU7-63P-201ENST00000459054 62 ntBASIC7.15□□□□□ -1.26
VARSP26640 RPS27P23-201ENST00000487608 251 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC073610.1-201ENST00000489971 396 ntBASIC7.15□□□□□ -1.26
VARSP26640 RPSAP51-201ENST00000497462 645 ntBASIC7.15□□□□□ -1.26
VARSP26640 MTND6P8-201ENST00000503471 522 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC024558.1-201ENST00000505008 528 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC008496.1-201ENST00000509131 295 ntBASIC7.15□□□□□ -1.26
VARSP26640 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.15□□□□□ -1.26
VARSP26640 AC022616.6-201ENST00000520479 119 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.15□□□□□ -1.26
VARSP26640 AL121579.2-201ENST00000555466 590 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC044860.3-201ENST00000559957 368 ntBASIC7.15□□□□□ -1.26
VARSP26640 UBE2CP4-201ENST00000561405 535 ntBASIC7.15□□□□□ -1.26
VARSP26640 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.15□□□□□ -1.26
VARSP26640 AC007255.2-201ENST00000604053 631 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC008385.1-201ENST00000604421 355 ntBASIC7.15□□□□□ -1.26
VARSP26640 CUX2P1-201ENST00000606426 298 ntBASIC7.15□□□□□ -1.26
VARSP26640 AL136985.2-201ENST00000607372 535 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC006335.3-201ENST00000613408 292 ntBASIC7.15□□□□□ -1.26
VARSP26640 uc_338.15-201ENST00000615470 191 ntBASIC7.15□□□□□ -1.26
VARSP26640 OR1N1-202ENST00000619659 939 ntBASIC7.15□□□□□ -1.26
VARSP26640 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
VARSP26640 Z69720.2-201ENST00000624755 279 ntBASIC7.15□□□□□ -1.26
VARSP26640 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.15□□□□□ -1.26
VARSP26640 AC010149.2-201ENST00000637608 315 ntBASIC7.15□□□□□ -1.26
VARSP26640 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 PPBPP2-201ENST00000513150 1362 ntBASIC7.15□□□□□ -1.26
VARSP26640 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VARSP26640 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
VARSP26640 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VARSP26640 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.15□□□□□ -1.27
VARSP26640 AC112243.1-201ENST00000623949 3851 ntBASIC7.15□□□□□ -1.27
VARSP26640 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
VARSP26640 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
VARSP26640 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.27
VARSP26640 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
VARSP26640 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
VARSP26640 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
VARSP26640 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
VARSP26640 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VARSP26640 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VARSP26640 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
VARSP26640 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 OR1S2-201ENST00000302592 978 ntBASIC7.14□□□□□ -1.27
VARSP26640 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VARSP26640 SNORA20.2-201ENST00000383922 131 ntBASIC7.14□□□□□ -1.27
VARSP26640 U3.23-201ENST00000391132 200 ntBASIC7.14□□□□□ -1.27
VARSP26640 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.14□□□□□ -1.27
VARSP26640 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VARSP26640 AC113608.1-201ENST00000398740 305 ntBASIC7.14□□□□□ -1.27
VARSP26640 RPL7P25-201ENST00000404151 721 ntBASIC7.14□□□□□ -1.27
VARSP26640 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 AL807761.1-201ENST00000417622 171 ntBASIC7.14□□□□□ -1.27
VARSP26640 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.14□□□□□ -1.27
VARSP26640 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
VARSP26640 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.14□□□□□ -1.27
VARSP26640 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.14□□□□□ -1.27
VARSP26640 USP24P1-201ENST00000433802 779 ntBASIC7.14□□□□□ -1.27
VARSP26640 FABP5P2-201ENST00000439042 408 ntBASIC7.14□□□□□ -1.27
VARSP26640 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.14□□□□□ -1.27
VARSP26640 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.14□□□□□ -1.27
VARSP26640 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.14□□□□□ -1.27
VARSP26640 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.14□□□□□ -1.27
VARSP26640 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VARSP26640 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.14□□□□□ -1.27
VARSP26640 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.14□□□□□ -1.27
VARSP26640 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.14□□□□□ -1.27
VARSP26640 YWHAEP1-201ENST00000453697 763 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms