Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AC079075.1-201ENST00000559543 878 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.66□□□□□ -1.66
CLPTM1O96005 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AC245884.10-201ENST00000597355 337 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AC008814.1-201ENST00000603797 406 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AC017076.1-201ENST00000607613 578 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AF129408.1-201ENST00000608767 431 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AC016597.2-201ENST00000613256 341 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 MIR1264-201ENST00000616374 69 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 MIR6826-201ENST00000617808 98 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 AL445528.2-201ENST00000620582 470 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.66□□□□□ -1.66
CLPTM1O96005 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AL356118.1-201ENST00000635272 1078 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 KPNA2P2-201ENST00000419546 1489 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.66□□□□□ -1.66
CLPTM1O96005 AL451142.2-201ENST00000429076 2090 ntBASIC4.66□□□□□ -1.66
CLPTM1O96005 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLPTM1O96005 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
CLPTM1O96005 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CLPTM1O96005 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLPTM1O96005 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLPTM1O96005 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CLPTM1O96005 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLPTM1O96005 SNORA72.3-201ENST00000365074 132 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 OR13C3-201ENST00000374781 1108 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 OR4K12P-201ENST00000406538 961 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.65□□□□□ -1.67
CLPTM1O96005 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.65□□□□□ -1.67
CLPTM1O96005 AL390774.1-201ENST00000411924 246 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AL133325.1-201ENST00000421090 382 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 SFR1P2-201ENST00000421841 730 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.65□□□□□ -1.67
CLPTM1O96005 RPS26P47-201ENST00000427219 348 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 DSTNP5-201ENST00000427921 523 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.65□□□□□ -1.67
CLPTM1O96005 CLIC4P1-201ENST00000453177 535 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 RN7SL517P-201ENST00000462240 305 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 RN7SL441P-201ENST00000492388 296 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AC104971.1-201ENST00000495117 578 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.65□□□□□ -1.67
CLPTM1O96005 AC021087.2-201ENST00000504656 1203 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AC097173.1-201ENST00000505862 819 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLPTM1O96005 AC138701.1-201ENST00000524329 714 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLPTM1O96005 AC023158.1-201ENST00000561632 1025 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AC005341.1-201ENST00000571086 708 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.65□□□□□ -1.67
CLPTM1O96005 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.65□□□□□ -1.67
CLPTM1O96005 MTCO3P22-201ENST00000603219 784 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AL096803.3-201ENST00000609032 532 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AL158196.1-201ENST00000616786 434 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AL133370.2-201ENST00000619934 439 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 AL023881.1-201ENST00000621088 301 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLPTM1O96005 EOGT-210ENST00000615922 1931 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
CLPTM1O96005 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
CLPTM1O96005 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLPTM1O96005 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 Z98755.1-201ENST00000407015 1384 ntBASIC4.65□□□□□ -1.67
CLPTM1O96005 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.65□□□□□ -1.67
CLPTM1O96005 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLPTM1O96005 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLPTM1O96005 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLPTM1O96005 AC074029.4-201ENST00000624796 1859 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLPTM1O96005 NXF4-202ENST00000416098 1465 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CLPTM1O96005 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLPTM1O96005 OR10J6P-201ENST00000289731 930 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLPTM1O96005 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLPTM1O96005 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CLPTM1O96005 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.64□□□□□ -1.67
CLPTM1O96005 IPMKP1-201ENST00000425988 855 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 AL512637.2-201ENST00000431287 1256 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.64□□□□□ -1.67
CLPTM1O96005 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.64□□□□□ -1.67
CLPTM1O96005 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.64□□□□□ -1.67
CLPTM1O96005 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.64□□□□□ -1.67
CLPTM1O96005 MOB1AP2-201ENST00000446060 614 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 AL606490.1-201ENST00000452266 765 ntBASIC4.64□□□□□ -1.67
CLPTM1O96005 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.64□□□□□ -1.67
CLPTM1O96005 MTATP6P14-201ENST00000455189 673 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms