Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 RBMY2KP-201ENST00000418221 992 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK1AO00322 BX119904.1-201ENST00000432026 348 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 LYPLA1P1-201ENST00000434514 622 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 AL353748.1-201ENST00000440753 474 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.22□□□□□ -1.73
UPK1AO00322 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 AC231760.1-201ENST00000498002 260 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK1AO00322 IFITM8P-201ENST00000522529 394 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 CYP4A43P-201ENST00000568156 121 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 RPL23AP97-201ENST00000568955 471 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.22□□□□□ -1.73
UPK1AO00322 MIR6780A-201ENST00000615089 68 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 MTND4P26-201ENST00000415971 1359 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 AC139769.1-204ENST00000472297 1931 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 MTCO1P22-201ENST00000604619 1360 ntBASIC4.22□□□□□ -1.73
UPK1AO00322 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPK1AO00322 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
UPK1AO00322 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
UPK1AO00322 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.21□□□□□ -1.73
UPK1AO00322 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
UPK1AO00322 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPK1AO00322 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPK1AO00322 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPK1AO00322 AL592182.3-201ENST00000642132 3304 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
UPK1AO00322 RNU1-15P-201ENST00000353977 144 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 SNORD113.2-201ENST00000364166 89 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 RNU6-167P-201ENST00000384292 106 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 LAP3P1-201ENST00000403648 294 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 MTND4LP21-201ENST00000415303 295 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 AC062016.2-201ENST00000420950 676 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.21□□□□□ -1.74
UPK1AO00322 RPS12P10-201ENST00000427031 377 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 AC073335.1-201ENST00000427776 363 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 AP001324.1-201ENST00000428553 399 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.21□□□□□ -1.74
UPK1AO00322 RPL23AP25-201ENST00000430973 463 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK1AO00322 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK1AO00322 AC092905.1-201ENST00000467527 949 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.21□□□□□ -1.74
UPK1AO00322 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK1AO00322 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK1AO00322 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 AP001781.1-201ENST00000530977 207 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 AL713998.2-201ENST00000604538 1198 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 AC096586.2-201ENST00000610260 441 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 AL161616.1-201ENST00000611867 286 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 AC100827.5-201ENST00000615883 426 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPK1AO00322 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.21□□□□□ -1.74
UPK1AO00322 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 NEAT1-202ENST00000501122 22743 ntBASIC4.21□□□□□ -1.74
UPK1AO00322 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPK1AO00322 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.21□□□□□ -1.74
UPK1AO00322 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.74
UPK1AO00322 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UPK1AO00322 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UPK1AO00322 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPK1AO00322 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPK1AO00322 SNORD74.4-201ENST00000364129 80 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 RNVU1-6-201ENST00000364688 164 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UPK1AO00322 RNU2-50P-201ENST00000410494 143 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AL139128.1-201ENST00000413921 941 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 RPL23AP43-201ENST00000446445 471 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.2□□□□□ -1.74
UPK1AO00322 AC012671.1-201ENST00000451912 203 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AL513533.1-201ENST00000453728 415 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.2□□□□□ -1.74
UPK1AO00322 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.2□□□□□ -1.74
UPK1AO00322 RPL7AP10-201ENST00000481016 791 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 TRBV8-1-201ENST00000481590 279 ntBASIC4.2□□□□□ -1.74
UPK1AO00322 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.2□□□□□ -1.74
UPK1AO00322 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms