Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 IGKV1-32-201ENST00000519290 311 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AP000859.1-201ENST00000525536 307 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 NOP56P3-201ENST00000549457 385 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 CD24P2-201ENST00000565486 219 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC034236.3-201ENST00000605999 461 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 MIR6780A-201ENST00000615089 68 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AL645927.2-201ENST00000618350 349 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 CASC19-261ENST00000641853 1638 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 RANP4-201ENST00000413361 655 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL606490.7-201ENST00000433136 191 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL359265.2-201ENST00000434367 631 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL512661.1-201ENST00000434586 1253 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 RPL12P18-201ENST00000437175 325 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MOB1AP2-201ENST00000446060 614 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL513533.1-201ENST00000453728 415 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC006967.1-201ENST00000467608 589 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 RPL12P20-201ENST00000475538 479 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC093770.1-201ENST00000511559 571 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC034244.2-201ENST00000514668 858 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 UBTFL9-201ENST00000534504 1148 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC137768.1-201ENST00000549998 553 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 RN7SL690P-201ENST00000582087 240 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC005242.1-201ENST00000585658 438 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC002069.2-201ENST00000603580 883 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC112503.2-201ENST00000609005 552 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL161616.1-201ENST00000611867 286 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC018926.1-201ENST00000616335 435 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC074140.1-201ENST00000621617 208 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AC099654.8-201ENST00000637757 681 ntBASIC5.09□□□□□ -1.59
SIX4Q9UIU6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX4Q9UIU6 AL672167.1-204ENST00000641875 3017 ntBASIC5.09□□□□□ -1.6
SIX4Q9UIU6 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.6
SIX4Q9UIU6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.09□□□□□ -1.6
SIX4Q9UIU6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC133552.1-201ENST00000569988 4007 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC017002.4-201ENST00000604721 1525 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC026523.2-201ENST00000625039 7739 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 Z86062.1-201ENST00000406773 777 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 SNORA79B-201ENST00000410557 148 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC002524.1-201ENST00000411687 547 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AL590139.1-201ENST00000416267 400 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 ATG4AP1-201ENST00000416893 538 ntBASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.08□□□□□ -1.6
SIX4Q9UIU6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms