Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC233982.1-201ENST00000451247 436 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 VDAC2P4-201ENST00000452925 711 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC096992.1-201ENST00000459808 709 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 PPIAP21-201ENST00000464473 501 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 OR52A4P-201ENST00000472867 958 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 RN7SL583P-201ENST00000475692 287 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 TCP11X3P-202ENST00000514289 1254 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 EEF1A1P37-201ENST00000522748 715 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 OR5AM1P-201ENST00000532136 1032 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC092747.2-201ENST00000545069 983 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 MTATP6P24-201ENST00000576835 677 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 MIR1269B-201ENST00000580405 75 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 MIR4311-201ENST00000580794 100 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC010487.1-201ENST00000594408 1172 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AL392112.1-201ENST00000605115 829 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC009318.3-201ENST00000616916 503 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 AC006386.1-201ENST00000619436 415 ntBASIC5.16□□□□□ -1.58
LRFN1Q9P244 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LRFN1Q9P244 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRFN1Q9P244 C4BPAP1-201ENST00000415474 1893 ntBASIC5.15□□□□□ -1.58
LRFN1Q9P244 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.58
LRFN1Q9P244 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.15□□□□□ -1.58
LRFN1Q9P244 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRFN1Q9P244 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
LRFN1Q9P244 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRFN1Q9P244 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRFN1Q9P244 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRFN1Q9P244 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRFN1Q9P244 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRFN1Q9P244 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
LRFN1Q9P244 RNU6-146P-201ENST00000384602 108 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 MIR551A-201ENST00000385042 96 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 RPL11P3-201ENST00000395256 523 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 VDAC2P1-201ENST00000399358 958 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC009804.1-201ENST00000400949 179 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 SPTLC1P2-201ENST00000407089 121 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 RN7SKP17-201ENST00000411242 351 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 DPPA2P3-201ENST00000411853 655 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AP000534.2-201ENST00000412729 568 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC084290.1-201ENST00000434995 374 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 CR769776.1-201ENST00000441254 787 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC019185.1-201ENST00000442718 389 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 RPL21P71-201ENST00000465598 459 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC126121.1-201ENST00000482313 553 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC090638.1-201ENST00000498296 909 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC113347.3-201ENST00000509113 148 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 RNU6-941P-201ENST00000516346 108 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AF279873.1-201ENST00000523393 313 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC107918.3-201ENST00000533272 382 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 MTND3P13-201ENST00000574391 343 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 NF1P5-201ENST00000588287 448 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 SUGT1P3-202ENST00000604259 383 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 MIR6837-201ENST00000620884 64 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms