Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC092647.2-201ENST00000452998 253 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 RPL23AP71-201ENST00000470966 469 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 RN7SL717P-201ENST00000478343 297 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 RNU1-6P-201ENST00000516290 144 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 OR5M7P-201ENST00000526140 972 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AP001804.2-201ENST00000533932 910 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC092490.3-201ENST00000545370 572 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 FKBP1BP1-201ENST00000553366 325 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 NDUFA5P11-201ENST00000567995 343 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 HNRNPCP4-201ENST00000571636 900 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC011447.4-201ENST00000587562 111 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 RPL7P50-201ENST00000600588 727 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 AC010329.2-201ENST00000595195 2737 ntBASIC3.43□□□□□ -1.86
AP1S3Q96PC3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP1S3Q96PC3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 BX005019.1-201ENST00000561881 1810 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL445437.1-201ENST00000623157 3087 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 RNA5SP455-201ENST00000365190 119 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 SNORA17A-201ENST00000391185 133 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 GLULP6-201ENST00000399502 913 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC114755.2-201ENST00000413520 361 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 RPL23AP25-201ENST00000430973 463 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 RPSAP41-201ENST00000439695 860 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL389915.2-201ENST00000454576 441 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC037198.2-201ENST00000478845 733 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 PARP4P3-201ENST00000510265 317 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 RNA5SP362-201ENST00000516048 118 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 UBTFL9-201ENST00000534504 1148 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 CYP4A43P-201ENST00000568156 121 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 FKBP1AP1-201ENST00000594588 318 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL359513.1-201ENST00000614364 557 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL022401.1-201ENST00000619498 108 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 SNORA17.5-201ENST00000630429 132 ntBASIC3.42□□□□□ -1.86
AP1S3Q96PC3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.42□□□□□ -1.86
AP1S3Q96PC3 USP9YP4-201ENST00000424401 1745 ntBASIC3.41□□□□□ -1.86
AP1S3Q96PC3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AP1S3Q96PC3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AP1S3Q96PC3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP1S3Q96PC3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.41□□□□□ -1.86
AP1S3Q96PC3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP1S3Q96PC3 AC097504.1-201ENST00000515103 2415 ntBASIC3.41□□□□□ -1.86
AP1S3Q96PC3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms