Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 DNAJB5P1-201ENST00000454004 806 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AL035407.2-201ENST00000454090 378 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 RPL7P32-201ENST00000457119 744 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 RPL15P21-201ENST00000495592 567 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC098976.1-201ENST00000513014 541 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 RNA5SP303-201ENST00000516192 130 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC012400.1-201ENST00000518452 381 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC104417.1-201ENST00000523974 751 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 NDUFS5P6-201ENST00000529136 295 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC090888.2-201ENST00000559765 1144 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AL162431.4-201ENST00000604674 411 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC011626.1-201ENST00000604710 562 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 Z99289.3-201ENST00000605586 594 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC011472.4-201ENST00000615848 491 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 MIR6839-201ENST00000620425 113 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 CASC19-264ENST00000641912 1184 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC092747.4-201ENST00000620519 1861 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 RNU6-236P-201ENST00000363886 106 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 RNU1-74P-201ENST00000384108 171 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SKP97-201ENST00000410966 333 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 RNA5SP498-201ENST00000411342 120 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 SETP15-201ENST00000412724 337 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 VTA1P1-201ENST00000414044 866 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 VPS26BP1-201ENST00000417155 755 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 MTND4P3-201ENST00000417829 541 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 MTND2P16-201ENST00000419987 799 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC093655.2-201ENST00000425735 631 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 FHP1-201ENST00000442741 703 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 RPL10P17-201ENST00000453852 316 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 RPL7AP52-201ENST00000458096 790 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC079203.1-201ENST00000487972 404 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC134050.1-201ENST00000495088 933 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC010627.1-201ENST00000503819 1294 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC008837.1-201ENST00000511513 412 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 IGKV2-18-201ENST00000522607 343 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC010503.3-201ENST00000594355 540 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC069307.1-201ENST00000602820 447 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC113368.1-201ENST00000603736 382 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 ELOCP35-201ENST00000604289 336 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 MIR6768-201ENST00000610734 72 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 FRG1HP-204ENST00000617940 757 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC091932.2-201ENST00000623014 291 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AP003497.2-201ENST00000624220 967 ntBASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDK5RAP3Q96JB5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms