Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 OR10J6P-201ENST00000289731 930 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 RNU2-22P-201ENST00000411266 212 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 ELOCP18-201ENST00000434209 337 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 H2AFZP6-201ENST00000444403 394 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC234781.3-201ENST00000452540 973 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC112Q8NEF3 RPS29P22-201ENST00000472363 168 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 PPM1AP1-201ENST00000502740 1135 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC091868.1-201ENST00000508746 304 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC124068.1-201ENST00000563131 678 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC020910.3-201ENST00000603701 874 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC073575.2-201ENST00000614212 627 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 RMST_9.1-201ENST00000619945 193 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC112Q8NEF3 IQCB2P-201ENST00000401788 1633 ntBASIC5□□□□□ -1.61
CCDC112Q8NEF3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC112Q8NEF3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC018529.3-201ENST00000624212 2254 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 RNU1-15P-201ENST00000353977 144 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 RNU1-63P-201ENST00000383902 164 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AL591848.1-201ENST00000413092 322 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC104837.2-201ENST00000427236 424 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC007686.1-201ENST00000488511 463 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC011453.2-201ENST00000603737 729 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 FAM25E-202ENST00000608562 189 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AL031666.3-201ENST00000609320 1006 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AC010435.1-201ENST00000623353 1177 ntBASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC112Q8NEF3 AL442639.1-201ENST00000625030 1899 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AL391684.1-202ENST00000641293 1636 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 RNA5SP123-201ENST00000363244 119 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 HMGB3P7-201ENST00000400214 611 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 COX6B1P1-201ENST00000415962 213 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 H2AFZP5-201ENST00000446960 382 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AL121877.1-201ENST00000453704 622 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 ISCUP1-201ENST00000454451 448 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 RPS5P7-201ENST00000456664 608 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AC092324.1-201ENST00000468671 324 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AC139783.2-201ENST00000504847 1145 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 IGHV3-63-201ENST00000518422 341 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 OR5M7P-201ENST00000526140 972 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 ADAD1P2-201ENST00000588476 646 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AC068790.5-201ENST00000602741 355 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 FAM27B-201ENST00000610601 213 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AL121873.1-201ENST00000616013 524 ntBASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AC067931.1-201ENST00000624190 671 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms