Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC078899.1-201ENST00000521432 1185 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 MTATP6P15-201ENST00000527233 835 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AL121594.2-201ENST00000541658 472 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 LSM3P2-201ENST00000551246 273 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC245036.5-201ENST00000596330 847 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC069307.1-201ENST00000602820 447 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC011472.4-201ENST00000615848 491 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC004943.3-201ENST00000624116 600 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AP002967.1-201ENST00000624203 539 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC139792.2-201ENST00000624218 587 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC073869.7-201ENST00000640874 297 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 LINC01808-202ENST00000641680 1116 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 AC104964.3-201ENST00000606115 2860 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC44A4Q53GD3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 Y_RNA.472-201ENST00000384322 102 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 MIR320B1-201ENST00000390209 79 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AL035419.1-201ENST00000397037 564 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 TAF13P2-201ENST00000416876 286 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 C1DP1-201ENST00000426049 402 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC138761.5-201ENST00000433967 325 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AL353093.1-201ENST00000441292 436 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AL445669.2-201ENST00000454425 421 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC007686.1-201ENST00000488511 463 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC023050.1-201ENST00000498198 304 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC110775.1-201ENST00000513721 462 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC023824.3-201ENST00000569003 562 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 ELOCP28-201ENST00000590044 317 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC109583.2-201ENST00000617367 129 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC123767.1-202ENST00000620407 817 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 AC145207.9-201ENST00000623802 325 ntBASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC44A4Q53GD3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SLC44A4Q53GD3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RNU6-543P-201ENST00000362576 108 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RNU1-149P-201ENST00000390870 161 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 DNAJC19P6-201ENST00000401853 280 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AL021331.1-201ENST00000402817 582 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 VN1R21P-201ENST00000426703 765 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC022022.1-201ENST00000430304 178 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AL049745.1-201ENST00000433953 286 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 403.6 ms