Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC012671.1-201ENST00000451912 203 ntBASIC3.45□□□□□ -1.86
CCL20P78556 OR52Y1P-201ENST00000452418 828 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.45□□□□□ -1.86
CCL20P78556 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCL20P78556 UBA52P3-201ENST00000491303 382 ntBASIC3.45□□□□□ -1.86
CCL20P78556 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCL20P78556 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.45□□□□□ -1.86
CCL20P78556 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.45□□□□□ -1.86
CCL20P78556 RN7SKP183-201ENST00000517169 324 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.45□□□□□ -1.86
CCL20P78556 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.45□□□□□ -1.86
CCL20P78556 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.45□□□□□ -1.86
CCL20P78556 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.45□□□□□ -1.86
CCL20P78556 OR11J2P-201ENST00000555298 907 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.45□□□□□ -1.86
CCL20P78556 AC234775.3-201ENST00000564612 656 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AC141257.3-201ENST00000572906 215 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.45□□□□□ -1.86
CCL20P78556 AC008536.1-201ENST00000602872 669 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AC064801.1-201ENST00000612025 407 ntBASIC3.45□□□□□ -1.86
CCL20P78556 MIR6837-201ENST00000620884 64 ntBASIC3.45□□□□□ -1.86
CCL20P78556 AP003072.5-201ENST00000623872 773 ntBASIC3.45□□□□□ -1.86
CCL20P78556 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.45□□□□□ -1.86
CCL20P78556 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.45□□□□□ -1.86
CCL20P78556 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCL20P78556 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCL20P78556 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCL20P78556 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCL20P78556 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 LINC00622-201ENST00000562811 1570 ntBASIC3.44□□□□□ -1.86
CCL20P78556 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.44□□□□□ -1.86
CCL20P78556 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCL20P78556 MT-RNR1-201ENST00000389680 954 ntBASIC3.44□□□□□ -1.86
CCL20P78556 Z98745.1-201ENST00000402553 494 ntBASIC3.44□□□□□ -1.86
CCL20P78556 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.44□□□□□ -1.86
CCL20P78556 RN7SKP206-201ENST00000410823 293 ntBASIC3.44□□□□□ -1.86
CCL20P78556 RPS3P2-201ENST00000421346 701 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 ARAFP1-201ENST00000422172 605 ntBASIC3.44□□□□□ -1.86
CCL20P78556 PPIAP17-201ENST00000438507 471 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AL356535.1-201ENST00000440335 398 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.44□□□□□ -1.86
CCL20P78556 VN1R96P-201ENST00000446052 858 ntBASIC3.44□□□□□ -1.86
CCL20P78556 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCL20P78556 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.44□□□□□ -1.86
CCL20P78556 RPL7P39-201ENST00000481157 744 ntBASIC3.44□□□□□ -1.86
CCL20P78556 IGLV2-34-201ENST00000490007 283 ntBASIC3.44□□□□□ -1.86
CCL20P78556 RPL36AP41-201ENST00000493820 306 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AC108145.1-201ENST00000503770 153 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.44□□□□□ -1.86
CCL20P78556 AC109458.1-201ENST00000508858 316 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.44□□□□□ -1.86
CCL20P78556 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.44□□□□□ -1.86
CCL20P78556 AC022826.1-201ENST00000519383 805 ntBASIC3.44□□□□□ -1.86
CCL20P78556 NPM1P6-201ENST00000521088 871 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.44□□□□□ -1.86
CCL20P78556 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.44□□□□□ -1.86
CCL20P78556 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.44□□□□□ -1.86
CCL20P78556 AC105129.1-201ENST00000560250 297 ntBASIC3.44□□□□□ -1.86
CCL20P78556 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 MTND2P13-201ENST00000577438 1039 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CCL20P78556 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.44□□□□□ -1.86
CCL20P78556 AC095038.2-201ENST00000621464 1070 ntBASIC3.44□□□□□ -1.86
CCL20P78556 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 CASC19-222ENST00000641321 1173 ntBASIC3.44□□□□□ -1.86
CCL20P78556 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
CCL20P78556 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.44□□□□□ -1.86
CCL20P78556 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCL20P78556 CPHL1P-201ENST00000461341 3407 ntBASIC3.44□□□□□ -1.86
CCL20P78556 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCL20P78556 LINC02471-203ENST00000641941 4752 ntBASIC3.43□□□□□ -1.86
CCL20P78556 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCL20P78556 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCL20P78556 AC093535.2-201ENST00000624769 2326 ntBASIC3.43□□□□□ -1.86
CCL20P78556 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.43□□□□□ -1.86
CCL20P78556 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.43□□□□□ -1.86
CCL20P78556 AC011155.1-201ENST00000316512 456 ntBASIC3.43□□□□□ -1.86
CCL20P78556 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCL20P78556 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCL20P78556 AC093719.1-202ENST00000392735 373 ntBASIC3.43□□□□□ -1.86
CCL20P78556 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.43□□□□□ -1.86
CCL20P78556 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCL20P78556 AP002530.1-201ENST00000405705 684 ntBASIC3.43□□□□□ -1.86
CCL20P78556 AL136131.1-201ENST00000406079 803 ntBASIC3.43□□□□□ -1.86
CCL20P78556 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.43□□□□□ -1.86
CCL20P78556 RPS20P14-201ENST00000412545 360 ntBASIC3.43□□□□□ -1.86
CCL20P78556 GJA6P-201ENST00000415117 1042 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms