Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC012414.6-201ENST00000568241 401 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC074051.3-201ENST00000570238 358 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 AC090236.2-201ENST00000587933 1101 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC079089.3-201ENST00000603094 673 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AL359091.2-201ENST00000609303 556 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC055764.2-201ENST00000610089 670 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.24□□□□□ -1.57
CLRN1P58418 AL355974.3-201ENST00000617383 467 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC073348.1-201ENST00000623002 331 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 AC135068.5-201ENST00000624197 983 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 AL138820.1-201ENST00000617901 5305 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CLRN1P58418 TTC41P-205ENST00000551270 3963 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLRN1P58418 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 RNU6-839P-201ENST00000363347 108 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 RNU6-1215P-201ENST00000384441 102 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 RNU6-1300P-201ENST00000391046 108 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC016739.1-201ENST00000405359 345 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 PIGPP2-201ENST00000411569 458 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.23□□□□□ -1.57
CLRN1P58418 RAD23BP2-201ENST00000416003 1207 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 ARAFP2-201ENST00000440565 559 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 TXNP5-201ENST00000441043 315 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC092809.1-201ENST00000441469 474 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.23□□□□□ -1.57
CLRN1P58418 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 CFL1P4-201ENST00000451536 498 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 OR6C5P-201ENST00000452388 923 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 PPIAP27-201ENST00000453800 265 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 RPS4XP12-201ENST00000461747 709 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC005165.2-201ENST00000466070 380 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 RPL7P16-201ENST00000479738 738 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.23□□□□□ -1.57
CLRN1P58418 PFN1P8-201ENST00000497012 543 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 SETP14-201ENST00000497538 873 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC010460.1-201ENST00000507087 466 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC109471.1-201ENST00000511631 612 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC011853.1-201ENST00000518911 454 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC134698.4-201ENST00000523451 826 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLRN1P58418 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 NPM1P47-201ENST00000560843 856 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AL163952.1-202ENST00000569625 600 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AP005262.1-201ENST00000582646 997 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC008507.3-201ENST00000585753 472 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 AL136363.2-201ENST00000604173 851 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 RPL12P48-201ENST00000605620 304 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AP001437.1-201ENST00000608783 456 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 AC005962.2-201ENST00000611427 652 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms